Lacticaseibacillus paracasei ATCC 334: LSEI_1363
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Entry
LSEI_1363 CDS
T00407
Name
(GenBank) DNA polymerase III catalytic subunit, DnaE type
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lca
Lacticaseibacillus paracasei ATCC 334
Pathway
lca03030
DNA replication
lca03430
Mismatch repair
lca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LSEI_1363
03430 Mismatch repair
LSEI_1363
03440 Homologous recombination
LSEI_1363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lca03032
]
LSEI_1363
03400 DNA repair and recombination proteins [BR:
lca03400
]
LSEI_1363
Enzymes [BR:
lca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LSEI_1363
DNA replication proteins [BR:
lca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LSEI_1363
DNA repair and recombination proteins [BR:
lca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LSEI_1363
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
ABJ70141
UniProt:
Q039I1
LinkDB
All DBs
Position
1350202..1353498
Genome browser
AA seq
1098 aa
AA seq
DB search
MTFTQLQVHSNYTLLHSPLALSDLISAAKSRGYSAIALTDTNVVYGLVEFYRQAKAAGLK
PLLGMQIAIDDAKLLVIAKNNQGYHQLLKISTQIMLATSPVAFADLLPLTGLVAITLPDS
PFSAAVVANEHDRAVAFLQELDNKQPEAVYVGLDEAHLDTPLPAFATSQQLHLMALGNVL
YRDPTDAFTQKVMAAIGDGSQLNFRDPVLTDAGPWWLKPPADASAPFVAAGLQAAVDNAA
QIADQTDVTITFKQPQLPHYQTPDQLASKDYLTKLAQEGLANRFHDQPIPTTYQQRLQYE
LDVIIKMGFADYFLVVWDVMNYAHKVNIMTGAGRGSATGSLVSYALAITEVDPIAYDLLF
ERFLNPARAQMPDIDLDIPDNRRGELIQYVHDKYGRNHMAQIITFGTFGAKQAIRDVARV
FGMSQFESNTWSRAIPNLLHMDLKTAYDQSQPLKNLVADSPKNRMLFQTALALEGLPRHY
STHAAGIVLSEEPLTDTVALQPSGDGLEQTQVPKDDVEALGLLKMDFLGLKNLNILAAAS
HFVTRDTGRTFDPKQIPLNDQPTLALFARGDTNGVFQFESAGIKNVLRKLRPTDFEDVVA
VNALYRPGPMENIDTFIARKNGQEPIAYPDPALEKILKPTYGVLVYQEQVMQVASVMGGF
SLGEADLLRRAMSKKKSSVLAAEQDKFIEGAVKQGFPEATAKTVYAYIDRFANYGFNRSH
AVAYSMVAFWLAYLKVHDPAAFFAALMNASMNNLPKLRTYVQEAKARQVALLGPDINTSN
GGFKLSDGKIRFGLLSVKGMRRDFSEAIFTARKNGPFKDFRDLLQRLEPKWLKADNFKPL
ILAGAFDSFDDNRAQTIANLDELINSVKLAGNDVGLFSVLAPKPIVVPEMPAGERLEEEA
NVLGVYLSGHPVDKYAPLKTQYTLVNVVDLAEGRTVDILLLVRHIKRIRTKTGKPMAFVD
GQDATGTVSLTVFPNLYPTLEKIETDMVVLVNGRVEKRNDDLQLIVNRIQDAAPLLEALP
KAQLFIRLDADNVDARTDLLKKLQTAHGPIPVITVDTTSKESVLLDKRYWVTADTSLMAD
LESRFGAANVVLRKRQEE
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttacccaattacaggttcatagcaattataccttattacacagcccgttggca
ctgtcggatcttatcagcgcagcaaaatcacgcggttattcggccattgccttaacggac
actaatgttgtttatggtttagtcgagttttatcgacaggcgaaagcggctggcttgaag
ccgttattaggcatgcagatcgcgattgatgatgccaaacttttagtgattgccaaaaat
aatcagggttaccatcagttacttaagatctccacgcaaattatgctagcaacttcgccg
gtggcctttgcggacttattgcctttgacaggcttagtcgccatcaccttaccggattca
ccattttcggcggcagttgttgctaacgaacacgacagagctgtcgcttttttacaggag
cttgataataaacagccggaagcggtgtatgttggtctggatgaggctcatttagatacg
ccattgccggcatttgcgactagtcagcaacttcacctaatggcgttaggtaacgtactg
tatcgtgatccgactgatgcttttacgcaaaaagtgatggcagcgattggtgatggtagt
cagttgaactttcgtgacccagttttaaccgatgctgggccatggtggttaaaaccgcca
gcagatgcaagtgcaccttttgttgctgctggactacaggcggcagttgacaacgcggct
cagatagcggatcaaacggatgtgacgattacgttcaagcagccgcagctacctcattat
caaacgccagatcagcttgcgtctaaagattacctgaccaaactggctcaagaaggcctc
gctaaccgttttcacgatcagccgattccgacaacctatcagcagcgtttgcaatatgag
ctggatgtcattatcaaaatgggatttgctgattactttctggtggtttgggatgtgatg
aattacgctcacaaggtcaatattatgactggggctgggcgaggatcagctacgggctcc
ttggtcagttacgcgctggctattacagaagtcgatccgattgcttatgatctgctgttt
gaacggtttctgaatcctgctcgagcgcaaatgcctgatattgatttggacattcctgat
aaccgtcgtggcgagctgattcaatatgtccatgacaaatatggccgaaatcacatggcc
cagattattacttttgggacgttcggcgcgaaacaggcgatcagagatgtggcacgcgtt
ttcggtatgagtcagtttgaaagtaatacttggagcagagcaattccaaacttgttgcac
atggatttaaaaacagcatacgatcagagtcagccgttgaaaaatttggtggccgattca
ccaaaaaatcgcatgctgtttcaaaccgctttagcattggaggggttgccgcgacattat
tccacgcatgcagccgggattgtgctttctgaagaaccactaactgacaccgttgccttg
caacccagtggcgatggtcttgaacagacgcaggtacccaaagatgatgttgaagcactt
gggctgcttaaaatggattttctgggtttgaaaaacctcaatattttagccgccgccagt
cattttgtcacccgtgatactggccggacgtttgatccaaaacagattccgctgaatgat
caaccgacactcgctttgtttgcccgcggtgatactaacggcgtttttcaattcgagtct
gctggtatcaaaaatgttttgcgcaaactgcggccaactgattttgaagatgttgtggct
gtcaacgccttgtatcgtccaggtccaatggaaaacatcgacacgttcattgcccgcaaa
aatgggcaagaaccgattgcttatcctgatccggccttggagaagattttgaaaccgact
tatggtgtcttggtttatcaggagcaggtcatgcaggtggccagtgtcatgggcgggttc
agtcttggcgaggcggatttgttgcggcgcgccatgagtaagaagaaatcatcagtgctg
gcagccgaacaggataaattcattgaaggtgcggtcaagcaaggattccctgaggcgact
gccaaaacggtttatgcttatattgatcgatttgcgaattacggcttcaatcgttctcac
gcagttgcttatagtatggtcgcattttggttagcgtatttaaaagtgcatgatccagcc
gccttttttgcggcattgatgaatgctagtatgaataatttgccgaagctccggacttac
gtacaagaagccaaagcgcgtcaggtagctttattaggtcctgacatcaacaccagcaat
ggtggctttaagttgagcgacgggaagattcgctttggacttttgtctgtcaaagggatg
cgccgtgacttttccgaagccatttttaccgctcgtaaaaatggcccgtttaaagatttt
cgcgatttactacagcgcctcgagccgaagtggttaaaggcagataatttcaaaccattg
attcttgccggtgcctttgatagctttgatgataaccgggcacagacaattgcgaactta
gatgaattaatcaactcggttaaacttgctggcaatgatgttgggttattttcagtgcta
gcacctaaaccgattgtggtgccggaaatgccggcaggcgaacggcttgaagaagaggct
aatgttttaggcgtttacctttctggtcatccggttgacaaatatgcccctttgaaaacg
caatacacattagtcaatgtggtggatttagcagaaggtcgcacggttgatattttgctt
ctggttcgacacatcaagcggatccggaccaaaactgggaagcctatggcgtttgtggat
ggacaggatgcgactggcaccgtttcgctgacggtttttcccaatctatatccaacatta
gaaaaaattgagaccgacatggtggtactagtgaacgggcgagttgaaaaacgcaatgac
gacttgcaactcattgtgaaccggattcaagatgccgcaccgttacttgaggccttacca
aaagcacagttatttattcgcttggatgcggataatgttgacgcccggaccgatttactg
aaaaaattgcaaactgcccatggaccaattccggttatcactgtcgacacgaccagcaag
gagagcgttttgctagataagcgatactgggtcactgctgacaccagcttgatggctgat
cttgaatcgcggtttggtgcggctaatgtggtgttgcgaaaacgacaagaagaatag
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integrated database retrieval system
