Lacticaseibacillus paracasei ATCC 334: LSEI_1490
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Entry
LSEI_1490 CDS
T00407
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lca
Lacticaseibacillus paracasei ATCC 334
Brite
KEGG Orthology (KO) [BR:
lca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lca03400
]
LSEI_1490
Enzymes [BR:
lca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LSEI_1490
DNA repair and recombination proteins [BR:
lca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LSEI_1490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ABJ70266
UniProt:
Q038V6
LinkDB
All DBs
Position
complement(1487804..1491343)
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AA seq
1179 aa
AA seq
DB search
MGLQFILGDATTDHAGTMATMVQANLQADSQNQIFYLVPNHIKFEAEVDLLKRLRAQAAS
VNGVYAQNRVQVLSFSRLAWYFLKNTALYQQPRLDRASNTMLVAKILGESKEELTIYAGE
AHNTGFVTQLADQLSELVTGRITAEDLNTTVAALTPGDRHRAKLRDLGIILDHYEAEIGP
YATNASLLSGLQQVMRNQDLSHTFIYLNDFNVFSASETGLVETMIETAAEVTVSLVLDKP
YPAAPPVAPNLFLPAGRLYHRLYQKAKTMKVPIRLDRFAKPRPLSEGMKHLADWWQTSTN
LQPQAPAQTAQNKEVELAVATDPYHELRTVARQIYQAVRQGARYRDFLILARRLDPYAAV
IPAIFEEFNIPQFTDLERPMKDHPLVVLIESLFAIQDHDYQYQDVMRLLHTELLLPENMD
IAAFRDALDTTDNHLVRTGITGKKRWTQTDPWRYFQRNPNADDSQLDPEADKTAQINAIK
TLVADTVPQLLRQWQTAKTGREAAASLYQWLQTTGVIDQLNVWRQTANADGDLSRSQANE
QAWDTFTQLLNDYATILGEADFNRDQFRELLAAGFASATYTQIPSTLDSVVISETGLVRL
AKAKHVYVIGATNTAMPDVPNDSGVLNSEERQLLAAQLPDDRFLPEQGPTTTLGDPFINY
LGFMAASEKLTLSYPMQNTQENSENQASPYFRQLAQALQLTPATWAPAGLGTSLKAVLGS
QRAMLSDFVRAAGEAQHQKLPLSRSWQGVLASLKQTTLAPLAQKLAGSLTYQNDPGRLDP
TLAVQLYGRDMNVSVSRLETYYRNQFEYFLKYGLLLQPRPEFELSPADTGSLFHAVLDQY
LTQLRDAGQTLADVTAADVAAAVPPLVAAITKRPGYEILGSTHRMAYLTSRLSRLLIQVL
TNMRQQQRRTGFRPMRTELQFGRIGDTRGLPGLSWPLPHGGRVNVRGKIDRLDVYRESDA
QRFMVVDYKSTQHRFDDSDAYYGIALQMLTYVEAMANVPADPPFVPAGALYFHLQDPKFK
FSTDLDLDIDRLKAFKYLGFLVAKDGADLAAVDKTISAETGGRSMMVPLGFKKDGAFNYN
QSNILTPEDLSAYLLHNQALIIDAASRILAGDIALAPFQYGQESTVISNSDYQSIMLFDP
ATGFDHYNHVPKLKRKEVLGRVTTDPTQIPHHRQEDSQA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcaattcattttaggagacgcaacaacggaccacgctggcacgatggcgaca
atggtccaagctaatctgcaagccgattcacaaaaccaaattttttatttagtccctaat
catatcaaatttgaagccgaagtcgacttgttgaaacggttgcgggcacaagcagcatcc
gtcaatggtgtatatgcgcaaaatcgagtgcaggtgctgtctttctccagacttgcctgg
tatttccttaaaaacactgcgctttatcaacagccacgacttgatcgggccagtaacacg
atgttggtcgcaaagatactgggtgaaagcaaggaagaattaacgatttatgctggcgaa
gcgcataacactgggtttgtgacacaactggcggatcaattaagcgaattagtgaccggt
cgtatcacagcagaagatctgaatacgacagtagccgctttaacaccaggcgatcggcac
cgtgctaaattgcgagatctggggatcattctggatcattatgaagcggaaatcggccct
tatgccactaatgccagcctactaagtgggttgcaacaggtgatgcgcaatcaggacctg
agccacacattcatttatctcaatgacttcaacgtcttttcagcttcagagactggattg
gtcgaaacaatgattgaaacggctgctgaggtgaccgttagtttagtgctggacaagcca
tatccggctgcgccgccagtggcacctaatttattcttacctgcaggccggttgtatcac
cgcctttatcaaaaagccaaaacgatgaaagtaccgatccggctagatcgttttgctaaa
ccgcgtccgctaagcgaaggcatgaagcaccttgctgattggtggcaaacgagtaccaat
ttacaaccacaggcgcctgcacagacagcacagaacaaagaagttgagttggcagtggcg
actgatccatatcatgaattacggacggttgcccgtcaaatctatcaagccgtccggcaa
ggtgcacgttaccgcgattttctgattttagcccgtcgcttggatccatacgcagcggtg
attccggccatctttgaagaattcaacatccctcaatttactgatctcgaacggccaatg
aaggatcatccgctagtcgtactcattgaaagtctttttgccatacaagaccacgattat
caatatcaggatgtcatgcgccttttgcataccgagttgttactacctgagaatatggat
atcgcggcttttcgtgatgctttagacacaacagataaccatcttgttcgcactggcatt
accggcaaaaaacggtggacacagaccgacccatggcgctattttcagcgcaatcctaac
gctgacgattcgcaacttgatcccgaggcagataaaactgcccagattaatgcaatcaag
actttggttgcggacacggttccgcaattgctgcgtcaatggcagactgccaaaactggt
cgcgaagccgcggccagcttatatcaatggctgcaaacgactggtgtgattgatcagctg
aatgtgtggcgacaaaccgctaacgctgacggtgatttaagtcgcagtcaagccaacgag
caggcttgggataccttcacccaattgttaaatgactatgcgaccattttaggagaagct
gacttcaatcgtgatcagtttcgagaactgttggcggccggctttgctagtgccacctac
acgcagattccgtcgacgctggactcggtggttatttccgaaacgggtttggttcgtttg
gccaaggcaaaacacgtttacgtgattggcgcaacaaacaccgcgatgcctgatgtgcct
aacgatagtggtgtcttaaatagcgaagagcggcaactgttggcggctcagcttccagat
gaccgttttttacctgaacaaggtccgaccacaaccttaggcgatccttttatcaattat
cttggatttatggcagcttctgaaaaactgacacttagttaccccatgcaaaacacgcag
gaaaacagtgaaaatcaagcctcgccgtactttagacaactagcccaagcactgcaatta
acgcctgctacttgggcaccggctgggttggggacatctctaaaagcagttctgggtagt
cagcgggccatgctcagtgattttgttcgcgcggctggtgaagctcagcatcagaaattg
cctttgagtcgaagttggcaaggcgttttggccagtctcaaacaaaccacactggcaccg
ttagctcagaagctagcaggcagtttgacctatcaaaatgaccctggacgtcttgatccg
acattagcagtccaattgtacggtcgggacatgaatgtctcggtatcgcgattagagacg
tattatcgtaatcagtttgaatactttttgaagtatggtttgcttttacagccgcgacct
gaatttgagttatcgccagccgatactggtagtcttttccatgcggtgctggatcaatat
ctgactcagttgcgcgacgccggccagacattggccgatgtcaccgcggcagatgtagcg
gcggcggtcccgccattagtcgcggctatcacgaagcgcccgggttatgaaattcttggc
agtacccatcggatggcttatttgacgagtcgcttaagtcggttattgattcaagtgctg
acgaacatgcgccagcagcaacgccggaccgggttccgtccgatgcgcactgagttgcag
tttggccgaattggggataccaggggcttacctggcttgtcttggccgctgccgcatggt
ggtcgcgttaatgtacgcggcaaaattgaccgactagatgtctatcgagaatcagatgcg
cagcgatttatggttgttgattacaagagcacgcaacatcggttcgatgacagtgacgcg
tactatggcattgccttacagatgttgacgtatgttgaagcaatggcaaatgtcccagct
gatccgccatttgtgccagccggagcactgtattttcacttacaagatcctaagttcaaa
ttcagtaccgatcttgacctcgatattgatcgactaaaagcttttaaatatctaggtttc
ttggtagctaaagatggggcagacttggcggcggtagacaaaaccatttcagcagaaacc
ggtggacgcagcatgatggtgccacttggttttaaaaaagacggtgccttcaattataat
cagtcaaacattctgacaccagaagatctaagtgcctatcttttgcacaatcaggcattg
attattgatgctgccagtcggattttagccggggatatcgctttggcgccgtttcaatat
ggacaggaatccaccgttatcagcaacagcgattatcaaagtattatgctgttcgatccg
gcaaccgggtttgatcattacaatcatgtgccaaagttgaaacgcaaagaggtgcttggc
cgcgtcacaactgatcccacacaaattccgcatcatcgtcaggaggattcgcaagcatga
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