Lacticaseibacillus paracasei ATCC 334: LSEI_1607
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Entry
LSEI_1607 CDS
T00407
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lca
Lacticaseibacillus paracasei ATCC 334
Brite
KEGG Orthology (KO) [BR:
lca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lca03019
]
LSEI_1607
03009 Ribosome biogenesis [BR:
lca03009
]
LSEI_1607
03036 Chromosome and associated proteins [BR:
lca03036
]
LSEI_1607
Enzymes [BR:
lca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LSEI_1607
Messenger RNA biogenesis [BR:
lca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LSEI_1607
Ribosome biogenesis [BR:
lca03009
]
Eukaryotic type
90S particles
RNase
LSEI_1607
Prokaryotic type
rRNA processing factors
LSEI_1607
Chromosome and associated proteins [BR:
lca03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LSEI_1607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Dicer_dsRBD
DND1_DSRM
DUF6614
Motif
Other DBs
NCBI-ProteinID:
ABJ70381
UniProt:
Q038J1
LinkDB
All DBs
Position
complement(1604768..1605463)
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AA seq
231 aa
AA seq
DB search
MVASEFVSELRQRYGIEFHDLSLLDEAFTHSSYVNEHKELGLKDNERLEFLGDAVLELTV
SDYLYRKFPDKPEGDLTRIRAAAVQTAAFSAFSKEAHFDRYIKLGKGEEKAGARKRLTLL
EDLFEAFNGALYLDQGRDANIRFAQQIIFPKIDAGEFSADQDHKTALQEVLQQNGDVAIV
YHLLDEQGPAHERQFHVDVEVDGRVLGTGFGKNKKAAEQAAAKAALASLKR
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggttgcctcagagtttgtgagtgaattgcgtcaacgttatgggatcgaatttcatgac
ctcagtctattggatgaggcgtttacgcattcctcatatgtgaatgaacataaagaatta
ggtttaaaagacaatgaacgattggaatttttaggcgatgctgtcttggaattgacagtt
tcagattatttgtatcgcaagtttcccgacaaacccgaaggcgatctcacccgaattcgg
gcagcggctgttcagacagcggccttctcggctttttcaaaagaagcgcactttgaccgg
tatattaaacttggcaaaggtgaggaaaaagctggggcgcggaaacgcttaacgttgcta
gaagatttatttgaggccttcaatggcgccttataccttgatcaaggacgcgatgccaac
attcggtttgctcagcagattattttcccgaaaattgacgcgggagagttttcagccgat
caagaccacaaaacggctttacaggaagttttgcagcaaaatggtgatgtggcgattgtt
tatcacttattagatgagcagggaccagcccatgagcggcagttccacgttgatgtcgaa
gtcgatggccgggttttgggtaccggttttggcaagaataagaaagcggctgagcaagct
gctgcaaaagctgcattagccagcttgaaacggtaa
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