Lacticaseibacillus paracasei ATCC 334: LSEI_1628
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Entry
LSEI_1628 CDS
T00407
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lca
Lacticaseibacillus paracasei ATCC 334
Pathway
lca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LSEI_1628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lca03021
]
LSEI_1628
03400 DNA repair and recombination proteins [BR:
lca03400
]
LSEI_1628
Enzymes [BR:
lca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LSEI_1628
Transcription machinery [BR:
lca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LSEI_1628
DNA repair and recombination proteins [BR:
lca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LSEI_1628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF5397
Motif
Other DBs
NCBI-ProteinID:
ABJ70402
UniProt:
Q038H0
LinkDB
All DBs
Position
complement(1629904..1630152)
Genome browser
AA seq
82 aa
AA seq
DB search
MIIYPSIDKLLEKVPSRYSLAVLAAKRAHELESGDLKMLSDYKSDKSVGKALEEIAAGDV
IIDPKSKMLERDAEKLDRKDQE
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgattatttatccttcgattgataaactattggaaaaggtgccgtcccgttattcgcta
gccgtattggcggcaaaacgtgcccatgaattagaatctggtgatttgaagatgttgtca
gattataagtctgataaaagtgttggcaaagcgcttgaagaaattgcggctggcgatgtc
atcattgatcctaagtctaaaatgcttgagcgtgatgcagaaaaattggatcgcaaggat
caggaataa
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