Lacticaseibacillus paracasei ATCC 334: LSEI_1709
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Entry
LSEI_1709 CDS
T00407
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lca
Lacticaseibacillus paracasei ATCC 334
Pathway
lca03030
DNA replication
lca03410
Base excision repair
lca03420
Nucleotide excision repair
lca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LSEI_1709
03410 Base excision repair
LSEI_1709
03420 Nucleotide excision repair
LSEI_1709
03440 Homologous recombination
LSEI_1709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lca03032
]
LSEI_1709
03400 DNA repair and recombination proteins [BR:
lca03400
]
LSEI_1709
Enzymes [BR:
lca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LSEI_1709
DNA replication proteins [BR:
lca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LSEI_1709
DNA repair and recombination proteins [BR:
lca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LSEI_1709
NER (nucleotide excision repair)
GGR (global genome repair) factors
LSEI_1709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABJ70482
UniProt:
Q037Z0
LinkDB
All DBs
Position
complement(1701745..1704390)
Genome browser
AA seq
881 aa
AA seq
DB search
MASKTKLLLVDGNSVAFRAFFALYNQLDRFTNQDGLHTNAIYAFNNMLEIVLKAVQPDAA
LVAFDAGKTTFRTAKYADYKSGRAKTPSELLEQLPYIKELLDDMGIAHYELKDYEADDII
GTMAKRADEAGWETTIVTGDRDLTQLTTDRTTVQVTVKGVNELEAYTPAHVKEKLGITPA
QIIDLKGLMGDTSDNYPGVTKVGEKTALKLLNQYGSMENLYANVDDMKKSKLKENLINDK
DNAFLSKQLATIDRDVPLTVDLADVTYAGPDLDKLRDFYTKMNMNSLLKKIGGSVAKPVQ
AVHFSVLDEQSILALTKLTEPLTFEIEMLEDNYHVAEQIGFFIGTKEETYVSTDVTLLTL
PAVKRWLEDAKRDLTVFDGKRNIVAANRLGVKLPDIAFDVLLASYLINPDENSNDLGKIA
EDHDYHDLPRDEDIYGKGAKRQVPEDDKLFGQFARKSDALFALRPDLTGDLEKQEQTDLF
TDMEMPLSRVLAEMEIQGITLNAKTLKAMGTEFSQSIKILEEKIYAEAGVKFNLNSPKQL
GEILFEKLNLPVIKKTKTGYSTSVDVLNELKSASPIVQDILDYRGWAKLNSTYVVGLLKA
QLPDHKIHTRYLQTLTQTGRLSSVDPNMQNIPARDEGKIIRKAFVPSHEGWQIFSSDYSQ
IELRVLSHISGDENMQEAFKHGVDIHANTAMKIFGLSSPDQVTPDMRRQAKATNFGIVYG
ISDYGLSQNIGISRKQAKAFIDGYFDQYPKVHDYMDAMVKKAREDGYVETLFHRRRYLPQ
IHSRNFNLRKFAERTAMNTPIQGSAADIIKVAMIRMQKALDEAGLQAKMLLQVHDELIFE
APEEEIAQLSELVPKVMDSAVHLDVPLKVESHYGPTWFDAK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaaaacaaaattattattagtcgatggtaactcagtcgcatttcgtgcattt
tttgctttatataatcaattagaccgttttacgaaccaagatggcttgcacaccaacgcc
atttatgcgtttaacaacatgctcgagattgttttaaaggcagtccaaccagatgccgct
ttagtagcatttgatgcaggcaagacgacttttcgcacagccaaatatgctgattacaaa
agtggtcgcgccaagacaccgagcgaattgctggaacaattgccttatatcaaggaatta
ttggatgacatgggcatcgcgcattatgaattaaaggattacgaagccgatgacattatc
ggcacaatggctaagcgtgcggatgaggccggctgggaaacgacgattgtcacgggtgat
cgcgatttgacgcagctgacgaccgatcggaccacagttcaagtgacagtgaagggtgtc
aatgagcttgaagcctacaccccagcacatgtcaaagaaaagcttggcatcacaccggct
caaattattgatctcaaaggtttgatgggtgatacctcggacaactatcctggggtgacc
aaggtcggtgaaaaaacagctctgaaattgctcaatcaatacggaagcatggaaaacctc
tatgctaatgtggatgacatgaaaaagagcaagcttaaagagaatttgatcaacgataaa
gataacgctttcttaagcaaacagttggcaacgatcgatcgcgatgtaccgcttaccgtg
gacttagcggatgtgacatacgctggaccggatttagacaaactccgggacttctataca
aaaatgaatatgaattcgttgctcaaaaaaattggtggtagtgtcgctaaacctgttcag
gcggttcatttttccgtgctggatgagcaatcgattcttgcactcaccaaactgaccgaa
cctctgacttttgagattgaaatgctcgaggataattatcatgtggccgaacaaatcggt
ttctttattggcactaaggaagaaacttatgtgagtaccgatgtcaccttgctgacgctg
ccagcggttaaacggtggctggaagatgccaaacgagatctgacagtttttgatggcaaa
cgaaacatcgtcgccgctaatcgactcggcgtgaaattaccggatatcgcttttgacgtg
ttattggcgtcctatttgattaatcctgacgaaaacagcaatgatttgggtaaaatcgct
gaagatcacgattatcatgacttgccgcgtgatgaggatatttatggcaaaggcgccaaa
cggcaagtgccagaagacgataagctgtttggccagtttgctcgcaagtctgatgctttg
ttcgcattgcggcctgatttgactggtgatttggaaaaacaggaacaaacggacttattc
acagatatggaaatgccgctttctcgggttttggcagaaatggaaattcaagggattacc
ctaaatgctaaaacactgaaggctatgggcactgaattctcacaaagcatcaagattttg
gaagagaaaatctatgcagaagctggcgtgaagttcaatttgaactcaccaaagcagctc
ggcgaaattctttttgaaaaattgaatctgcctgtgatcaagaaaacgaagaccggttac
tcgacaagcgttgacgtgttgaacgaattgaaatcggcaagtccgattgtgcaggacatt
ttggattatcgcggctgggctaaattgaattcgacttatgttgtcggcttgttgaaggcg
caattgcctgatcataagattcatacccgctatttgcagactttgacgcaaactggccga
ttgagctcagttgatcctaacatgcagaatattcctgctcgtgatgaaggtaagattatc
cgcaaggcctttgtaccgtcacatgaaggttggcaaatttttagttctgactattcccaa
attgagttgcgggtgttgtcgcatatttccggggatgagaatatgcaggaggcgtttaaa
catggcgtcgacattcacgccaacactgcgatgaagatttttggcctgagttcgccagat
caagtcacacctgatatgcggcggcaagccaaggcaactaacttcggcattgtgtatggc
attagtgactatggtctatcccaaaacattggcatttcccgtaaacaggcaaaagcgttc
attgatggttattttgatcaatatcctaaggttcatgattatatggatgcgatggtcaag
aaggcgcgtgaagacggctatgtcgaaaccctgttccatcggcggcgctatctgccacaa
attcactcacgcaacttcaatctgcgtaagtttgccgagcggaccgctatgaatacgccg
attcagggtagcgctgcggatattatcaaggtagccatgattcgcatgcaaaaggccttg
gatgaggccggtttgcaagctaaaatgcttctacaggttcacgatgaactcatcttcgag
gcacctgaagaagaaattgcccagcttagcgagctcgtgcccaaagtcatggactcagca
gttcaccttgatgtgccattaaaggttgaaagtcattatggaccaacttggttcgacgct
aaataa
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