Entry |
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Name |
(GenBank) DEAD/DEAH box helicase
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KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:lcad00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PXX05_02425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:lcad03019]
PXX05_02425
03009 Ribosome biogenesis [BR:lcad03009]
PXX05_02425
Enzymes [BR:lcad01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PXX05_02425
Messenger RNA biogenesis [BR:lcad03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PXX05_02425
Ribosome biogenesis [BR:lcad03009]
Prokaryotic type
rRNA helicases
PXX05_02425
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
548494..550164
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AA seq |
556 aa
MTQELLNFSALNLSATLLKALEDMKFKTPSPVQAQTIPLLLQGRDVIAQAQTGTGKTAAF
ALPILQRLSAKSQATQALILAPTRELAIQVAEQFELLSAHSNVSVSVLCGGQDYRRQLKQ
LREGAQIVVGTPGRILDHIDRGTLQLGNLTTFVLDEADEMLRMGFIEDVETILAKLPAEK
QIALFSATMPSRIRHIANSYLNNPESVEIRAETATVKAIEQRFLFASGAQKPDALLRILA
VEEYQGVIVFVRTKSSTEDVAQSLQQQGYRAMAIHGDITQALREKVIAQFRQGSIDILVA
TDVAARGLDVERVTHVINYDVPHDCETYVHRIGRTGRAGRSGVTVLFVTPKEARILNTIE
RHTRQRIEKIVVPNDHAIQMARQERFMANIKMRLQHEHLPSYQYLVEEFLKQNQVSAVDV
AAALALMLNQDKPWKRELPKPPRVAREARVQERDNNNFKSGRGQKSDRGRKQFRDDYPQE
LFRLDVGRVHGVKPGNIVGAIANEAGLESRYITGLKIHEDHSTVRLPQGMSKKIFQDLNG
AWVCGRQLKLTSLGNA |
NT seq |
1671 nt +upstreamnt +downstreamnt
atgacacaagaattactaaacttttctgccctcaatttatccgcgactttattgaaagcg
ctggaggacatgaagtttaaaacaccatcaccggtccaggcacaaaccattcctttattg
ctacagggaagggatgttattgcgcaagcacaaacaggtactggcaagacggctgccttt
gcgctgccaattttacaacgtctatcagcgaaatctcaggcaacgcaagccttaattctt
gcgcctactcgcgagctagccattcaggttgcagaacaatttgagcttttgagtgctcac
agtaatgtctcagtctctgttctatgcggagggcaggattatcgacgtcaattaaaacaa
ttacgcgaaggagcacagattgtagtaggaactcctggtcgtatattggatcacattgat
agaggtacactgcaactaggtaatttgacaacctttgttcttgatgaagcagatgaaatg
ttacgaatgggctttattgaagatgtagaaacaattcttgccaagttgccagcagaaaaa
caaattgctttattctcagcaacaatgccatctcggattcgtcatatagcaaatagctat
ttgaataaccctgaatcagtagaaattcgtgctgaaacggcaacggttaaagcgattgaa
cagcgttttctatttgcttccggggctcaaaagccagatgctttgctacgcatattagcc
gtggaagaataccagggtgtgatcgtttttgtgcgcaccaagagcagtacagaagacgtt
gctcaatcactacagcaacagggctatcgtgcgatggcaattcatggggacattacgcaa
gcactacgtgaaaaagttattgctcaattcagacaaggatctattgatattctggtggca
accgatgttgctgcacgtggtttggatgtggagcgagttacccatgtaattaactatgat
gtccctcatgattgcgaaacctatgttcatcgaattggtcgaactggccgtgcgggccgt
agtggagtcactgtattatttgtaaccccaaaagaagcacgaattttaaatacgattgaa
cgtcatactcgccaacgtattgaaaaaattgtagttcctaatgatcatgcaattcaaatg
gcaagacaagagcgttttatggctaatatcaagatgcgtttgcagcatgagcatttacct
tcttatcaatatcttgttgaagagtttctcaaacaaaatcaggtttcggcagttgatgtt
gcagcggcgttggctctaatgctaaatcaggataaaccttggaagcgtgagctacctaaa
ccacctcgcgtggcaagagaagcacgcgtgcaggagcgcgacaataataacttcaaatct
ggtcgtggacagaaatcagataggggtagaaagcaatttcgagatgactatccacaagaa
ttatttcgtctcgacgtcggacgtgtgcatggtgttaagccgggtaatatcgttggagct
atagcaaacgaagcaggattagaaagtcgttatattacaggtcttaagattcatgaagat
cattctactgtgcgtttgccccaaggaatgtctaaaaaaatattccaggatttaaatggc
gcctgggtgtgtggtcgacagttaaaattaacatccttaggtaacgcatga |