Legionella cardiaca: PXX05_11925
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Entry
PXX05_11925 CDS
T08869
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lcad
Legionella cardiaca
Pathway
lcad03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lcad00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PXX05_11925 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcad03021
]
PXX05_11925 (rpoA)
03400 DNA repair and recombination proteins [BR:
lcad03400
]
PXX05_11925 (rpoA)
Enzymes [BR:
lcad01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PXX05_11925 (rpoA)
Transcription machinery [BR:
lcad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PXX05_11925 (rpoA)
DNA repair and recombination proteins [BR:
lcad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PXX05_11925 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WED42611
LinkDB
All DBs
Position
complement(2748243..2749229)
Genome browser
AA seq
328 aa
AA seq
DB search
MDIHEMMTPSVLKVDAKSPYHSRVVLEPLERGYGHTLGNALRRILLSSMPGYAITEVAID
GVLHEYSTIEGVQEDVVDILLNLKQVAIKLTTGREAVLTLSKQGPCQVTAGDIQLTHGQE
IVNPELVIATLNENGKLNMTLKVEKGVGFHSTDSFVRSFDEEIEQKSVGKLKLDNTFSPV
KKVAYFVDSARVENRTDLDKLTIDLETDGTLDPEEAIRISASILQRQLHAFVDMKFEESR
SDNKERNDFDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQKTENELLKTPNLGKKSL
TEIKDVLASRSLSLGMKLENWPPANLGE
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggacatacatgaaatgatgacaccatctgtgcttaaagtagatgctaagtcgccttac
cactcacgagtcgtacttgagcctttagagcgtggttatggtcatacgcttggcaatgct
ttaagacgaatacttttatcatctatgcctggctatgcgattacagaagtggcaattgat
ggtgtattacatgaatacagcacaattgagggtgttcaagaagatgttgtagacatcctc
ttaaacttaaagcaggttgctatcaaacttaccacaggaagagaagcagttttaacttta
agtaaacaaggtccatgtcaggtaactgcaggtgatattcaattgacccatggtcaggaa
atcgttaaccctgaattagttattgccactttaaatgaaaatggcaagttaaatatgaca
ttgaaggttgaaaaaggtgtcggattccattcaacggattcttttgtacgtagtttcgat
gaagaaattgaacaaaaatctgttggtaaattaaaactcgataatactttttcacctgtc
aagaaagttgcctattttgttgatagtgctcgcgttgagaatagaactgaccttgataag
ttaactattgatttagaaactgatggtacacttgatccagaagaagccattcgtatctct
gcatctatattgcaacgtcaattacatgcatttgtggatatgaagtttgaagagtcacgc
tctgacaataaggagcgaaatgatttcgatccgattttgttgagacctgttgatgatctg
gaattgaccgttcgctcagctaactgtctcaaagcagaaaatatttattatattggtgac
ttggttcaaaagacggaaaatgaactgttgaagacaccaaatctaggtaagaaatctctc
actgaaattaaagacgtacttgcttcacgctctttatctttgggaatgaagcttgaaaat
tggccgccagcaaatcttggcgagtaa
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