Leisingera caerulea: K3721_04940
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Entry
K3721_04940 CDS
T08528
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lcae
Leisingera caerulea
Brite
KEGG Orthology (KO) [BR:
lcae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcae03009
]
K3721_04940 (rimO)
Enzymes [BR:
lcae01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K3721_04940 (rimO)
Ribosome biogenesis [BR:
lcae03009
]
Prokaryotic type
ribosomal protein modification factors
K3721_04940 (rimO)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
DUF6802
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
UWQ54881
UniProt:
A0A9Q9HIB9
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All DBs
Position
complement(993213..994628)
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AA seq
471 aa
AA seq
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MTSTPSSNPPSLRPDLAPEPQFREAPRDGQPTLGMVSLGCPKALVDSERILTRLRAEGYG
ISPDYAGADAVIVNTCGFLDSAKAESLEAIGEALKENGKVIVTGCLGAEPDYIREHHPRI
HAVTGPHQYEQVLDAVHSAVPPSPNPYVDLLPAAGVKLTPRHFSYLKISEGCNHKCKFCI
IPDMRGKLASRPVHAVLREAEKLVEAGVRELLVISQDTSAYGLDRKYSAHPWKGADVRSH
IQDLSRELGKLAPADELWVRLHYVYPYPHVRELIPLMADPENALLPYLDIPFQHAHPDVL
RRMARPAAAAKTLDEINAWRATCPDITLRSTFIVGFPGETEAEFQHLLDWMDEAQLDRVG
CFKYENVDGARSNDLPDHVPEEVKQERWERFMEKAQAISEAKLAAKVGQTMQVIVDDIDE
DGIATCRTKADAPEIDGNLFIDEGTDGLQAGDLVTVEVDEAGEYDLWGRVT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtaccccgtccagcaacccgcccagcctccgccctgacctcgccccggaaccg
cagttccgcgaggcgccccgtgacggccagccgaccctcggcatggtgtcgctcggctgc
cccaaggcgctggtggacagcgagcgcatcctgacccggctgcgcgccgaagggtatggc
atctcacccgactacgcgggcgcggacgcggtgatcgtcaacacctgcggcttcctcgac
agcgccaaagccgaaagtctggaggcgattggcgaagcgctgaaggaaaacggcaaggtg
atcgtgactggctgcctgggcgccgagccggactatatccgcgagcatcacccgcgcatc
cacgcggtgaccggcccgcatcagtatgagcaggtgctggacgcggtgcattcggcggtg
ccgccctcgcccaatccttacgtggacctgctgcctgcagccggtgtcaaactgaccccg
cggcacttcagctatctgaagatttccgagggctgcaaccacaagtgcaagttctgcatc
atcccggacatgcgcggcaaactggcctcacgccccgtccacgccgtgctgcgcgaggcg
gagaagctggtggaggccggggtgcgcgagctgctggtgatcagccaggacacctccgcc
tacgggctggaccgcaagtattccgcccacccctggaagggcgccgacgtgcgcagccat
atccaggacctctcccgcgagctgggcaagctggcgcccgcggatgagctgtgggtgcgg
ctgcactatgtctacccctacccgcatgtgcgcgagctgatcccgctgatggcggaccct
gaaaatgcgctgctgccctatctggacatccccttccagcacgcccacccggacgtgctg
cgccgcatggcccggcccgcggcggcggccaagacgctggacgagatcaacgcctggcgc
gcgacctgcccggacatcaccctgcgctccaccttcatcgtcggcttcccaggcgagacc
gaggcggagttccagcacctgctcgactggatggacgaggcgcagctggatagagtgggt
tgctttaaatacgaaaacgttgacggtgcgcgctcgaacgatctgccggaccacgtgccg
gaagaggtcaagcaggagcgctgggagcgtttcatggagaaggcgcaggcgatttctgag
gccaagctggcggccaaggtcggccagaccatgcaggtgattgtcgacgacatcgacgag
gacggcatcgccacctgccgcaccaaggccgacgcgccggagatcgacggcaacctgttc
attgatgagggaacggacgggttgcaggccggtgatctggtgacggtcgaggtggatgag
gccggggagtatgacttgtgggggcgagtgacataa
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