Lichenostomus cassidix (helmeted honeyeater): 146420235
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Entry
146420235 CDS
T12101
Symbol
SNTA1
Name
(RefSeq) alpha-1-syntrophin
KO
K24063
alpha-syntrophin
Organism
lcai
Lichenostomus cassidix (helmeted honeyeater)
Pathway
lcai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
146420235 (SNTA1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
146420235
NCBI-ProteinID:
XP_084904633
LinkDB
All DBs
Position
Unknown
AA seq
488 aa
AA seq
DB search
MAAGRRAPRTGLLELRGPGGQWLRVLLTLAEDVLGVSPADGPGPGPEAPAAQLNGGEPGS
AAPEALANIRRTVRVVKQDVGGLGISIKGGRENKMPILISKIFKGLAADQTEALYVGDAI
LAVNGTDLSEATHDEAVQALKKTGKEVILEVKYMKEISPYFKNSSAGATVSWDPSPAAQQ
KRSSPLLPPRELRESRSVPLKMCYVSRKCLPTDPEHRYLEVCSADGRVALFLQAKDEATA
QSWLGAIQANAAALLPRVKEELRAQLAGAGTVAGRDIKHVGWLTEQLPSAGTRNLLAVLT
EKELLLYGSLPQSRDALGKPTHSYPLIATRLVHSGPAKGSALYEAERSFALRAGSRLGVQ
THLFSLESPRELALWTRLLVDGTHGAAELAQEVSAACTWKGQDCTLTVHIDKGFTISTSE
PGLSRTILLQQPFEKLQMSSDDGTKMLYLDFGGPEGEIQLDLHSCPKTIVFIIHSFLSAK
VTRLGLLA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcaggcgcgccccgcgcaccgggctgctggagctgcgcggccccggcggg
cagtggctccgcgtcctgctgaccctggccgaggacgtgctgggggtcagcccggcagac
ggccccgggcccggccccgaggccccggcggcgcagctgaacggcggcgagccgggctcc
gccgcgcccgaggcgctcgccaacatcaggcgcaccgttcgcgtcgtcaagcaggacgtg
ggggggctcggcatcagcatcaaaggtggccgagagaataaaatgcccatcttgatctcc
aagatctttaaggggctggcagcagatcagaccgaggcgctgtacgtgggggatgccatc
cttgccgtcaacggcaccgacctgtccgaggccacgcacgatgaggccgtgcaggccttg
aagaagacgggcaaggaagtgatcttggaagtgaagtacatgaaggagatctcgccctac
ttcaagaactcctcggcgggggcgacggtcagctgggacccctctcccgccgcccagcag
aagcgatcatcccccctgctgccccctcgggagctccgggagagccggagtgtccctctg
aagatgtgctacgtgtcccgcaagtgcctccccaccgacccggagcacaggtacctggag
gtgtgctcggcagatgggcgcgttgccctctttctgcaggcgaaggatgaggccacggcg
cagtcgtggctcggcgccatccaggccaacgctgctgcgctgctgccgcgggtgaaggag
gagctgcgggcgcagctggctggggctggcacggtggctggacgggacatcaagcacgtg
ggctggctgaccgagcagctccccagcgctggcaccaggaacctcttggctgtgctcacg
gagaaggagctgctgctgtacgggagcctgccacagagccgagacgccctgggcaagccc
acacacagctaccccctcatcgccaccaggctggtgcactcggggccggccaagggttcg
gcgctgtacgaggccgagcgctccttcgcgctgcgcgccggcagccgcctgggcgtgcag
acccatctcttcagcctggagagcccccgagagctcgccctgtggacgcggctgctggtg
gatggcacccacggcgccgccgagctggcccaggaggtctcggcagcctgcacgtggaag
gggcaggactgcaccctgaccgtccacatcgacaagggcttcaccatctccaccagcgag
cccgggctcagcaggaccatcctgctccagcagccctttgagaagctgcagatgtcttcg
gatgatggcaccaagatgctctacctggacttcggaggcccggagggagagattcaactg
gaccttcactcctgccccaaaaccattgtcttcatcatccactccttcctgtcggccaag
gtgacccggctggggctgttggcgtga
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