Lichenostomus cassidix (helmeted honeyeater): 146425438
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Entry
146425438 CDS
T12101
Symbol
LOC146425438
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X2
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
lcai
Lichenostomus cassidix (helmeted honeyeater)
Pathway
lcai04137
Mitophagy - animal
lcai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
146425438 (LOC146425438)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
146425438 (LOC146425438)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcai03019
]
146425438 (LOC146425438)
03009 Ribosome biogenesis [BR:
lcai03009
]
146425438 (LOC146425438)
04131 Membrane trafficking [BR:
lcai04131
]
146425438 (LOC146425438)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcai04147
]
146425438 (LOC146425438)
Messenger RNA biogenesis [BR:
lcai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
146425438 (LOC146425438)
Ribosome biogenesis [BR:
lcai03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
146425438 (LOC146425438)
Membrane trafficking [BR:
lcai04131
]
SNARE
SNARE associated proteins
Others
146425438 (LOC146425438)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
146425438 (LOC146425438)
Exosome [BR:
lcai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
146425438 (LOC146425438)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
ATPase
AAA_18
DUF815
ABC_tran
IstB_IS21
nSTAND_NTPase5
NB-ARC
TsaE
AAA_24
ResIII
Viral_helicase1
NACHT
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
146425438
NCBI-ProteinID:
XP_084897538
LinkDB
All DBs
Position
W:complement(8128398..8186867)
Genome browser
AA seq
806 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggatccgactctaaagccgatgacttatctactgctattttgaagcagaag
aacaggcctaatcggttaattgttgacgaagccatcaatgaagacaacagtgttgtgtca
ctgtcccaggcaaaaatggatgaactgcagctgttcagaggagacactgtcctgctaaaa
ggaaagaagaggcgagaagcagtctgcattgttctgtcagatgatacctgctcagatgag
aagattcgcatgaatagggttgttcgcaacaatctgagagtgcgcctgggtgacgtcatc
agcatccagccttgcccagatgtgaaatacggcaaacgtatccatgtgttaccaattgat
gacacagtagaagggatcacagggaatctgtttgaggtctatctaaagccatatttcctg
gaagcttacagacccatcaggaaaggtgacatcttcttggtgcgtggagggatgcgtgca
gtggagttcaaagtggtggagacagatccaagcccgtactgcatagttgctccggacacg
gtgatccattgtgagggagagcccatcaaacgagaggatgaagaggagtcactgaatgaa
gtgggctatgatgacattggtggctgccggaagcagctggctcaaatcaaagagatggtg
gaacttcccctccgacaccctgctctcttcaaggccataggggtgaagcctccacgtggg
attctgctgtatggtcctcctggcactggtaaaacactgattgcccgagcggtggccaat
gaaacgggggctttcttcttcctgatcaatggtcctgagatcatgagcaagctggctggt
gagtctgagagcaacctgaggaaagcctttgaagaagcagagaagaatgctcctgccatc
atcttcattgatgaattggatgccattgctcctaaaagagagaagacacatggagaggtg
gaacgtcgcattgtgtctcagctgctgactcttatggatggactgaaacagagagcacat
gtgatcgttatggcagccaccaacagacctaacagcattgacccagcactcaggcgattt
ggtcgttttgacagagaggtagatattggtatcccagatgccactgggcgcctggagatc
ctgcagatccacacaaaaaatatgaaactggctgatgatgtggatctggaacaggtggca
aatgagacccatggccatgttggtgctgacttggctgctctttgctcagaagctgctctt
caggctatcagaaagaagatggatctcatagacctagaggatgaaaccattgatgctgaa
gtgatgaactcgctggctgtgaccatggatgacttcaggtgggctctgagccagagcaat
ccttctgctcttcgggagactgtggtggaggtgccacaagttacctgggaagatattggt
ggtctagaagatgtaaagagagaactccaggaacttgtacagtatcctgtggaacaccca
gacaagttcctcaaatttggcatgaccccatcaaaaggggttcttttctatgggccacct
ggttgtggtaagacgctcctggccaaagccattgctaatgaatgccaggcaaacttcatt
tccatcaaggggcctgaattgctcaccatgtggtttggcgagtctgaagccaacgtgcgc
gagatctttgacaaagctcgccaagcagccccatgtgtgctcttctttgatgagctggac
tccattgccaaggcccgaggtgggaatattggcgacggcggcggtgctgcagatcgtgtc
atcaaccagatcctgactgagatggacggcatgtccaccaagaaaaatgtcttcatcatc
ggtgccaccaacaggccagacatcattgacccagccatcctgcgccctggccgcctggat
cagctcatctacatccccctgcccgacgagaagtcccgggttgcaattcttaaggccaat
ctgaggaaatcaccagttgccaaggatgttgacctggatttcctagccaagatgaccaat
ggcttttcgggggctgacctgacagaaatttgccaacgtgcctgcaaactggccatccgt
gaatccatcgagagtgagatcaggcgagagcgtgagaggcagaccaacccttctgccatg
gaggtagaggaggatgatccagttcccgagatccgcagggatcactttgaggaggccatg
cgctttgctcgccgctctgtcagtgataacgacatcaggaaatacgagatgtttgcacag
accctacagcagagccgtggctttggcagcttcaggttcccatcaggcaaccagggcggc
gccggtccaagccaaggcacaggaggtggcagcgggggcaatgtgtacagtgaagacaat
gatgatgatctctacggttaa
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