Lichenostomus cassidix (helmeted honeyeater): 146426215
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Entry
146426215 CDS
T12101
Symbol
MED16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
lcai
Lichenostomus cassidix (helmeted honeyeater)
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcai03021
]
146426215 (MED16)
Transcription machinery [BR:
lcai03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
146426215 (MED16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_WDR35_TULP_N
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
DSE1_N
WD40_CDC20-Fz
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
146426215
NCBI-ProteinID:
XP_084896365
LinkDB
All DBs
Position
28:3223953..3232183
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AA seq
830 aa
AA seq
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MDLAYVCEWEKKPKSNHCPSIPLVCAWSCRNLIAFTTDLRNEEEKDLTHMVHIIDTEHPW
DVYSVNSGHTEVITCLEWDQSGSRLLSADADGHIKCWSMTDHLANSWENTVGSVVEGDPV
VALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGLVTVS
LLKPNGQVLTATESLCRLRCRVALADVAFTGGGNIVVATSDGSSTSPVQFYKVCVSVVNE
KCKIDTEILPSLFMRCTTDPARKDKYPAITHLKFLARDMSEQVLLCASNQNNSIVECWSL
RKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVA
NDTKFFPGLGLALAFHDGSVHIVHRLSLQMMAVFYGSSSQRPVDEPSLKRPRTAGPLVHF
KAMQLSWTSLALAGVDSHGKLSMLRISPSMGHVLDMNMSLRHLLFLLEYCMVTGYDWWDI
LLHVQPSMVQNLVEKLHEEYMRQNAALQQVLSTRIVAMKASLCKLSSSTIARVCDYHAKL
FLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDVDIDKVMINLKTEEFVLEMTTL
QSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGASLGMFRELMVVIRIWGLLKPS
CLPVYTATSDTQDSMSLLFRLLTKLWLCCREENHITEPDDALIDECCLLPSQLLIPNIDW
LPINDGIISKLQNKQLVRLQFGKAPGLVGHTVSSQFDAFVRAPGQPKIDHLRRLHLGAYP
TEECKSCTRCGCVTMLKSPNKVTAVKQWEQRWIKNCLCGGLWRKMPLSYS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggacctggcgtacgtgtgcgagtgggagaagaagcccaagagcaaccactgcccctcc
atccccctggtgtgcgcctggtcctgccgcaacctcatcgccttcaccaccgatctccgc
aatgaggaggagaaagatctcacccacatggtccatatcatcgacactgagcacccgtgg
gatgtctactccgtgaactcaggccacactgaagtcatcacgtgcttggagtgggatcag
tcaggctccaggctgctctcggcagatgctgatggccacatcaagtgttggagcatgaca
gatcacctggccaacagctgggagaacacggtgggcagtgtggtggagggggacccagtg
gtggccctgtcctggctgcacaatggcgtcaagctggcgctgcatgtggaaaagtcagga
gcatcgaactttggcgagaagttctccagggtgaaattctctccgtctctgacgctgttt
ggtgggaagcccatggagggctggatcgccgtgaccatcagcgggctggtcactgtgtcc
ctcctcaagcccaacgggcaagtgttgacagccacggagagcctgtgccgcctccgctgc
cgcgtggccttggccgatgtcgccttcacgggcgggggcaacatcgtggtggccacgtct
gatggcagcagcacgtcccccgtgcagttctacaaggtctgtgtcagcgtggtgaatgag
aagtgcaagatcgacaccgagatcctgccgtccctcttcatgcgctgcaccacagacccc
gcgcgcaaggacaagtacccggccatcacccacctgaaattcctggctcgggacatgtca
gagcaggtgctgctttgtgcttccaaccaaaacaacagcattgtggagtgctggtctctt
aggaaggagggcctgcctgtcaacaacatcttccagcaaatctctcctgtggtgggagac
aagcagcccatgatcctgaagtggcggatcctgtctgccaccaacgatctggaccgagtg
tcagccgtggcactgccaaagctgccaatctccctgaccaacacagatctgaaggtggca
aacgacaccaagttcttccctgggctgggcctggccttggctttccatgatggcagtgtc
cacattgtgcaccggctgtccctgcagatgatggctgtgttttatggctcctcctcgcag
cgccccgtggacgagccgtccctgaagcgcccgcgcaccgcagggcccctggtgcacttc
aaggccatgcagctctcctggacatcgctggccctggccggtgtggatagccacgggaag
ctgagcatgctccgcatctccccctccatgggccatgtgctggacatgaatatgtccctg
cggcacttgctgtttctgttggagtactgcatggtgactggctatgactggtgggacatc
ctgctccacgtccagcccagcatggtgcagaacctggtggagaagctgcatgaggagtac
atgcgccagaacgcagccctgcagcaggtgctctccacacgcatcgttgccatgaaggca
tcactgtgcaagctctcctccagcaccattgcccgtgtgtgtgactaccatgccaagctc
ttcctcattgccatcagctgcaccctcaagtcgctgctgcgcccacacttcctcaacacc
ccggacaagagccccggggaccggctcaccgagatctgctccaagatcacggatgtagac
attgacaaggtgatgattaacctgaagacagaagagtttgtcctggagatgacgacgttg
cagtctctacagcagctcatccagtgggtgggggattttgtgctctacctgctggccagc
cttcccaaccagggctccccagtacgccctggacacagcttcctgcgcgacggcgcgtcc
ctcggaatgttccgggagctgatggtggtgatccgcatctgggggctgctgaagcccagc
tgcctccccgtctacacagcaacctccgacacccaggacagcatgtccctgctcttccgg
ctcctgaccaagctttggctgtgctgtcgtgaggaaaatcacattacagagcctgacgat
gccctgattgacgagtgctgcctcctgcccagccagctgctcattcccaacattgactgg
ctgcccatcaacgatggcatcatcagcaagctgcagaacaagcagctggtccggctgcag
tttgggaaggctcccgggctcgttggccacactgtctcttcccaatttgatgcctttgtc
agggcccctggacagcccaaaattgaccacctgaggcggctgcacctgggcgcataccca
acagaggaatgcaagtcctgtaccaggtgtggctgtgtcaccatgctgaagtctcccaac
aaggtgacagcagtgaagcagtgggagcagcgctggatcaagaactgtctgtgtgggggg
ctgtggaggaagatgccccttagctactcctga
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