Lichenostomus cassidix (helmeted honeyeater): 146427586
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Entry
146427586 CDS
T12101
Symbol
DSCAML1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
lcai
Lichenostomus cassidix (helmeted honeyeater)
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcai04515
]
146427586 (DSCAML1)
Cell adhesion molecules [BR:
lcai04515
]
Immunoglobulin superfamily
Other
146427586 (DSCAML1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
FN3_DSCAM-DSCAML_C
V-set
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
C2-set_2
Pur_ac_phosph_N
C1-set
Fn3_ROS1
Ig_6
V-set_CD47
Receptor_2B4
Ig_RIMBP2
Fn3_VIN3
fn3_2
Fn3_Dep-1_3rd
ChitinaseA_N
Lit
Motif
Other DBs
NCBI-GeneID:
146427586
NCBI-ProteinID:
XP_084937907
LinkDB
All DBs
Position
24:5809304..5901307
Genome browser
AA seq
2069 aa
AA seq
DB search
MWLVTFLLLYSLPKAHAEDVGTSLYFVNDSLQQVTFSSTVGVVIPCPAAGSPSAVLRWYL
ATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENSAGKIRSPNIRVKA
VFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSIIPENRFFITSYGG
LYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVSDPAESIPTMLDSFQSREVKAGR
LVELPCIASGYPNPAVRWIKDGRPLPADSRWTKRITGLTISDLRVEDSGTYICEVTNTFG
SAEVTGTLTVIDPLRVTLTPKKLKTGIGSTVILSCALSGSPEYVIRWYRNTDLVAVDDYI
SIRGISNETLLITAAQKSHSGAYQCFATRKSQTAQDFSIITLEDGTPRIVSSFSEKVVNP
GEQFSLMCAAKGAPPPTVTWALDDEPIPRDSGHRSNQYTMSDGTTVSHMNVTSPQIKDGG
VYRCTARNSVGSAEYQARINVRGPPSIRAMKNITAVAGRDTFINCRVIGYPYYSIKWYKD
SLLLPDNHRQVVFENGTLKLMDVQKGMDEGEYLCSVLIQPQLSISQSVHVTVKVPPLIQP
FEFPPASIGQLLYIPCVVSSGDMPIHITWRKDGHVILSGSGVTIESKEFMSSLQISSVSL
KHNGNYTCIASNDAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPKV
MWKHAKGSGNPQQYHPIPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKSM
FLTVKIPAMITSHPNTTIAIKGQTKELNCTARGERPIIIRWEKGDTVIDPDRNMRYAITT
KDNGDEVISTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKAR
SMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSIR
MYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPITSQSIQVTWKAPKKELQNGVIRG
YQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSEI
NATTLEDVPSQPPENVRAISITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYMDGEWGE
MQNITTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDIPGPPAGIKAVP
SSASSVVVSWLPPAKPNGIIRKYTIFCSSPGSGQPAPSEYETSPDQLFYRIAHLNRGQQY
LLWVAAVTSAGRGNISEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGEPVPAI
KWTKDSEDSAIPVTVDGHRLIQANGTLVLRSVKAEDSGYYTCTATNTWGFDTIIINLLVQ
VPPDQPRLTVSKTSASSITLAWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSFK
LESLKCGTWYKVKLAAKNSVGAGRISEIIEAKTHGRGEPGLRCPCPTRGSPPHPADSSSP
TEPSFSKDQHLFTHINSTHARLNLQGWSSGGCPITAIVLEYRPKGNWVWQSLRTNSSSEV
FLTELREATWYELRMKACNSAGCGNETTQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIA
CPVILATLGVALLFIIRKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLH
IDIPRVQLLIEDKEGIKQLGDDKATIPVTDTEFSQAVNPQSFCTGVSLHHPALIQNTGPL
IDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGIT
VTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEQLQHAKFEITECFI
SDSSSDQMTTGTTDNADSMTSMSTPSEPGICRFTASPPKPQDSERGKGVAVPIPHRASKS
DYCNLPLYVKSEAFFRKPDAHEPCPVVPPREASIRNLARAYHAQARHMTLEPGAKPLGLP
PPASAATTLPQRTLPMPGPAGPAPAPAASAAPAPPVAAEPPVAAAAEARVPTHSKVGGSR
DSLLEMSTSGVGRSQKQGAGAYSKSYTLV
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggtaacttttctcctgctgtactctttgccgaaagcacacgctgaagatgtt
ggaaccagcctctactttgtgaacgactccctgcagcaggtcaccttctccagcacagtg
ggggtggtgatcccctgcccggcagcagggtcacccagcgccgtccttcggtggtacctg
gccacaggtgacgacatctacgatgtgccccacatccggcatgtccatgccaatgggact
ttgcagctctaccccttctcgccatcagccttcaatagctttatccacgacaacgactac
ttctgcaccgcggagaactcggctggcaaaatcaggagcccaaacatccgtgtcaaagca
gttttcagggaaccgtacaccgttcgggtggaggaccaaaggtcgatgcgtggaaacgtg
gctgttttcaagtgcctcatcccctcttcagtgcaggaatacgttagcgttgtatcctgg
gagaaagacaccgtttctatcatcccagaaaataggttttttattacttcttatggaggt
ttgtacatatcggacgtgcagaaggaagatgccttgtccacctacaggtgtatcaccaag
cacaagtacagcggggagacgcggcagagcaacggcgcccggctctccgtctcagacccg
gcagagtccatccccacgatgttagacagcttccagtcccgggaggtgaaggcgggccgg
ctggtggagctgccctgcatcgcctcgggctaccccaacccggccgtgcggtggatcaag
gacgggcggccgctccccgccgacagccgctggaccaagcgcatcacggggctgaccatc
agcgacctgcgcgtggaggacagcggcacctacatctgcgaggtgaccaacaccttcggc
tccgcagaggtcacggggaccctcacggtcatagaccctctgcgagtgaccctcacacca
aagaagctcaaaacaggcatcggcagcaccgtcatcctctcttgtgccctcagcgggtcc
cccgagtacgtcatccgctggtaccggaacacggacctggtggcggtggatgactacatc
tccatccggggcatcagcaacgagaccctcctcatcacagctgcccagaaaagccactct
ggggcctaccagtgcttcgccacccgcaagtcccagacggcacaggacttctccatcatc
acgctggaggatgggaccccccgcatcgtctcctccttcagcgagaaggtggtcaacccc
ggggagcagttctccctgatgtgtgccgccaagggagctccgccgccgaccgtcacctgg
gcgctggacgacgagcccatcccgcgggacagcgggcaccgctccaaccagtacaccatg
tcagatggcaccaccgtgagccacatgaacgtgaccagcccgcagatcaaggacggcggc
gtgtaccggtgcaccgcgcggaactcggtgggcagcgccgaataccaagcgcgaataaac
gtaagaggtcccccgagcatccgtgccatgaagaacataacagcggtcgcgggtagggac
actttcatcaactgcagggtcatcgggtacccctattactccatcaagtggtacaaggac
tctctgctgctgcccgataaccaccgccaagtggtgtttgagaacggcaccctgaagctg
atggacgtccagaaaggcatggatgaaggagagtatctgtgcagcgtcctgatccagccc
cagctctccatcagccagagcgtccacgtcactgtcaaagtccctccgctgatccagccc
ttcgagttcccaccagcctccatcggacagctcctctacatcccctgcgtggtctcctcc
ggggacatgcccatccacatcacctggaggaaggatgggcacgtcatcctctccggttct
ggggtcaccatcgagagcaaggagttcatgagctccctgcagatctccagtgtctccctc
aagcacaatgggaactacacctgcatcgccagcaacgacgctgccaccgtcagccgggag
cggcagctcatcgtgcgggtgcctcctcgttttgtggtccaacccaacaaccaagatggc
atttatggaaaggctggggtgctgaactgctctgttgatgggtacccccctccgaaagtc
atgtggaaacacgctaaaggaagtggcaacccccagcagtaccaccccatccccctgacg
ggccgcatccagatcctgcccaacagctccctgctcatccgccacgtgctggaggaggac
atcggctactacctctgccaggccagcaacggcgtgggcacagacatcagcaagtccatg
ttcctcaccgtcaagatcccagccatgatcacctcccaccccaacaccaccatcgccatc
aagggccagaccaaggagctgaactgcacggcacggggcgagcggcccatcatcatccgc
tgggagaagggtgacactgtcatcgaccccgaccgcaacatgcgctacgccatcaccacc
aaggacaacggcgacgaggtcatctccaccctcaagctgaagccagccgaccgcggggac
tccgtcttcttctcctgtcacgccatcaactcctacggcgaggacagaggcttgatccag
ctcactgtccaagagccccctgacccgccggagctggagatccgtgaggtgaaagcccgg
agtatgaatttgcgatggacgcagcggttcgatggcaacagcatcatcactggcttcgat
atcgagtacaagaacaagtcagattcctgggattttaagcagtctacacgcaacatctcc
ccgaccatcaaccaggcaaacatcgtggacctgcaccctgcctctgtgtacagcatccgc
atgtactccttcaacaagatcggccgcagcgagcccagcaaggagctcaccatcagcacc
gaggaagcagctcccgatggccctccgatggatgtcaccttgcagcccatcacatcccag
agcatccaggtcacctggaaggccccgaagaaggagctgcagaacggggtgatccgtggc
taccagattggctaccgggagaacagcccgggcagcaatgggcagtacagcatcgtggag
atgaaggccacgggggacagcgaggtgtacacgctggacaacctgaagaagtttgcgcag
tacggggtggtggtgcaggcgttcaaccgcgcgggcacggggccctcgtccagcgagatc
aacgccaccacgctggaggacgtgcccagccagccccccgagaatgtcagggccatctcc
atcacctcggacgtggctgtgatctcatggtcagagcccccacgcagcaccctcaacggg
gtgctcaagggctaccgggtcatcttctggtccctctacatggacggagaatggggcgag
atgcagaacatcacaaccacacgggagcgagtggagctgcgtggcatggagaagttcacc
aactacagcgtgcaggtgctggcttacacccaggcgggtgacggcgtccgcagcagcgtg
ctctacatccagaccaaagaggacattccaggtcccccagctgggatcaaggctgtgcca
tcctctgccagcagcgtggtggtgtcctggctgcctccagccaagcccaacggcatcatt
cggaaatacaccattttctgctccagccctggctcggggcagccggcccccagcgagtac
gagaccagcccggatcagctcttctaccgcatcgcccacctgaaccggggacagcagtac
ctgctctgggtggccgctgtcacctccgccggccgtggcaacatcagcgagaaggtcacc
atcgagcctgcaggcaaagcccctgccaagatcatctccttcggaggcactgtcaccacg
ccgtggatgaaggacgtgaggctgccgtgcaactccgtcggggagccggtccctgccatc
aagtggaccaaggacagcgaggactctgccatcccggtgacagtggacggccaccgcctg
atccaggccaacgggacgctggtgctgcgctcagtgaaagccgaggactctggctactac
acctgcactgccaccaacacctggggctttgacaccatcatcatcaacctgctggtgcaa
gtgcctccggaccagccccgcctgactgtctccaagacttcggcatcatccatcacgctg
gcctggatccctggggacaatggtggcagctccatccgaggcttcgtgctccagtactcg
gtggacaacagcgaggagtggaaggatgtgttcatcagctcctccgagcgctccttcaag
ctggagagcctcaagtgtggcacatggtacaaggtgaagctggcggccaagaacagcgtg
ggtgctggccgcatcagcgagatcatcgaggccaagacacacggcagaggtgagcctggc
ctgaggtgtccctgccccacacgggggtcccctccccaccctgctgacagctcctctccc
acagagccctccttcagcaaggaccagcacctcttcacccacatcaactccacgcacgcc
aggctgaacttgcagggctggagcagcgggggctgtcccatcacggccatcgtgctggag
taccggcccaagggcaactgggtgtggcagagccttcgcaccaacagctccagcgaggtg
ttcctcaccgagctgcgcgaggccacctggtacgagctgcgcatgaaggcttgcaacagc
gccggctgcggcaacgagaccacgcagttcgccacgctggactacgatggcagcaccatc
cctccaatcaagtctgcccaaggggaaggtgatgatgtgaagaagctcttcaccatcgcc
tgccccgtgatcctggccacgctgggagtggccctgctcttcatcatccgcaagaagagg
aaggagaagaggctgaagaggcttcgagatgcaaagagtttggcagaaatgctgatcagc
aagaataaccgcagctttgacacgccggtgaagggacccccgcagggcccccgactgcac
atcgacatcccgcgggtgcagctcctcatcgaggacaaggaaggcatcaagcagctgggg
gatgacaaagccacgatcccggtgactgacacggagttcagccaggcagtgaacccccag
agcttctgcacaggcgtctctctgcatcacccagccctgatccagaacacagggccactc
atcgacatgtccgacatccgtcctggcaccaacccagtgtcgaggaagagcgtgaagtct
gcgcacagcacccgcaacaggtactccagccagtggacactcaccaagtgccaggcgtcc
acccctgcaaggaccctcacatcggactggaggacagtgggctcccagcatggcatcacg
gtcaccgagagtgacagctacagcgccagcctctcgcaggacacagacaaggggcggaac
agcatggtgtccacggagagcgcctcgtccacctacgaggagctggcacgagcctacgaa
cacgccaagctggaggagcagctgcagcacgccaagttcgagatcaccgagtgcttcatc
tccgacagctcctcggaccagatgaccacgggcaccacggacaacgccgacagcatgacc
tccatgagcaccccgtccgagccgggcatctgccgcttcaccgcctccccacccaagccc
caggacagcgagcggggcaagggcgtggctgtgcccatcccgcaccgcgccagcaagagt
gactactgcaacctcccgctgtacgtcaagtcggaggcctttttccgcaagcccgacgcg
cacgagccgtgcccggtggtgccgccgagggaagcctccatccgcaacctggcgcgggcg
taccacgcgcaggccaggcacatgacgctggagcccggcgccaagcccctggggctgcct
cccccggcctccgccgcaaccaccttacctcagaggactctccccatgcccggcccggcc
ggtcccgcacccgcgcccgccgccagtgccgccccggctccccccgtggccgccgagccc
cccgtggccgcggccgccgaggcgcgggtgcccacgcactccaaagtggggggctccagg
gactcgctgctggagatgagcacgtcgggggtaggcaggtctcaaaaacagggcgccgga
gcctactccaagtcctacacgctggtgtag
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integrated database retrieval system
