Lichenostomus cassidix (helmeted honeyeater): 146427667
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Entry
146427667 CDS
T12101
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
lcai
Lichenostomus cassidix (helmeted honeyeater)
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcai04121
]
146427667 (WDTC1)
Ubiquitin system [BR:
lcai04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
146427667 (WDTC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_WDR3_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_NOL10_N
TPR_17
Beta-prop_WDR75_1st
TPR_19
DSE1_N
WD40_RFWD3
ANAPC4_WD40
TPR_2
PAC11
Beta-prop_WDR90_POC16_2nd
TPR_1
Beta-prop_HPS5
TPR_11
ANAPC3
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
ASA1
Beta-prop_WDR19_1st
NBCH_WD40
TPR_6
Beta-prop_VPS8
TPR_16
TPR_BSK1_C
RMD1-3
Barstar
CFAP70_TPR_C
Motif
Other DBs
NCBI-GeneID:
146427667
NCBI-ProteinID:
XP_084937484
LinkDB
All DBs
Position
23:complement(343626..366612)
Genome browser
AA seq
691 aa
AA seq
DB search
MLGCTAALPIASLHLSHCKKMAKANITRDIIHRQIKERGALGFERHYHVTDPFIRRLGLE
AELQGHSGCVNCLEWNEKGDLLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLP
HSGDRILITGAADSKVHVHDLTVKETVHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIR
QYDLRENSKRSEVLIDLTEYCGQLVEAKCLTVNPQDNNYLAVGASGPFVRLYDIRMIHNH
RKSMKQSPSAGVHTFCDRQKPLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPDG
TELLVNMGGEQVYLFDLTYKQRPYTFLLPKKCHTSGEVQNGKTSTNGVSNGIHLHSNGFR
LSEGRTHVSPQVELPPYLERIKQQANEAFACQLWTQAIQLYSKAVQKAPNNAMLYGNRAA
AYMKRKWDGDHYDALRDCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFP
EQAHSSACDALDRDINAALFSKNDNAEDKKGGGPIRLRATGRKDSISEDEMVLRERSYDY
KFRYCGHCNTTTDIKEANFFGSNAQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCL
QPHPSYCFLATSGIDPVVRLWNPRPESETLNGRVVVDMEGASQANQRRMNADPLEVMLLN
MGYRITGLTSGGAGGSDDEDSSEGQVQCRPS
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcttggatgcacagcagctcttcccatagcttctcttcatctgtcccactgcaagaag
atggcaaaagccaacatcaccagagacatcatccacaggcagatcaaggagaggggagcg
ctgggcttcgagcggcactaccacgtcactgaccccttcatccgccgcctggggctggag
gctgagctgcagggtcactctgggtgtgtcaactgtctggaatggaatgaaaaaggagac
ttgttggcctctggctctgatgaccagcataccattgtgtgggatcctctgcaccacaag
aaactcctttctatgcacacaggacacactgcaaacatcttttctgtcaagttcctgccg
cactcgggcgatcgaatcctcatcacgggagctgcagattccaaggtgcatgtccatgac
ctgactgtcaaggagactgtgcacatgtttggagatcacaccaacagagtgaagaggatt
gccacggctcccatgtggccaaacaccttctggagtgcagcagaagatgggttaatcaga
cagtacgacctgcgggagaacagcaaacgttccgaggtcctgatagacctgaccgagtac
tgtgggcagctggtggaggccaagtgcctgacagtgaacccccaggacaacaactacctg
gctgtgggagccagcgggcccttcgtgcggctctacgacatccgcatgatccacaaccac
aggaaaagcatgaagcagagtccttcagctggagtgcacacgttctgtgacaggcagaaa
cccctcccggacggggcggctcagtactacgtggcagggcaccttccagtgaagctccca
gactataataaccggctgagggtcctggtggccacgtatgtcaccttcagccctgatggc
actgagctcttggtcaacatgggaggggagcaggtctatttgtttgatctgacatacaaa
cagcgaccatacacttttcttctcccaaagaagtgccacacttcaggggaagtgcagaat
ggaaaaacctctaccaatggagtgtccaatgggattcatctccacagcaacggcttccgc
ttgtccgagggaaggacacacgtgagccctcaagtggagttgcctccatacctggagagg
atcaagcaacaagccaacgaggcctttgcctgccagctgtggactcaggccatccagctg
tacagcaaagctgtgcagaaggcccccaacaatgccatgctctacgggaacagagctgct
gcctacatgaagcgcaagtgggatggggaccattacgatgctctgagggactgcttgaag
gccatatccctaaatccatgccacctgaaggcccatttccgcctcgcccgctgtctcttt
gaactcaagtacgtggcagaagcactggagtgtctggatgactttaaagggaagtttcca
gaacaagcacacagcagtgcctgcgatgcactagacagggacatcaacgctgccctcttc
tccaagaatgataacgctgaagacaagaagggcggtggccccatccggctgcgagccaca
ggccgcaaggactccatctctgaggacgagatggtgctgagggagcgcagctacgactac
aaattccgatactgtggtcactgtaacaccacgacagacatcaaagaggccaatttcttt
ggcagcaatgcccagtacattgtcagcggctcagacgatggctccttcttcatctgggag
aaggaaaccaccaacctggtgcgagtgctgcagggagatgaatccattgtgaactgtctc
cagcctcatcccagctactgcttcctggccaccagcggcatcgacccagttgtgcgactc
tggaaccccaggccagagagtgagaccctcaatggccgcgtggttgtggacatggaaggt
gcttcccaagccaaccagaggcggatgaacgccgacccgctggaggtgatgttgctgaac
atggggtacaggatcacaggactgaccagtggtggggctggaggctcagatgatgaagac
agctcagaggggcaagtccagtgccggcctagctaa
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