Lichenostomus cassidix (helmeted honeyeater): 146427961
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Entry
146427961 CDS
T12101
Symbol
LOC146427961
Name
(RefSeq) nodal homolog
KO
K04666
nodal
Organism
lcai Lichenostomus cassidix (helmeted honeyeater)
Pathway
lcai04060
Cytokine-cytokine receptor interaction
lcai04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
146427961 (LOC146427961)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
146427961 (LOC146427961)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
lcai04052
]
146427961 (LOC146427961)
Cytokines and neuropeptides [BR:
lcai04052
]
Cytokines
Transforming growth factors (RSTK binding)
146427961 (LOC146427961)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
146427961
NCBI-ProteinID:
XP_084936843
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All DBs
Position
22:534825..537286
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AA seq
393 aa
AA seq
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MRVPLRSAPALALCTLALLRLGCAPTRALTWAPTRTSTRALTWAPTWAPARAPPRCPPLM
LQLLRAPPAPLRAAAAAALSLYPHGSLQNGSRWALSFDMSSLSSSQEVSLAQLRVHLPGL
SHAHNISLDIYHSQRRRCRGDGTCSHQLFLGTVAGSPSATQASWKVFEVTNLLRSWLHQA
VVTGHHSPTGSGQWEVSGSAAPATTALTDAGHRDPALPQDVADRVLLLVFSKDKSPGDHS
LIRTAETSKYIMRDSSSRGEGTRRQRRNRIEKQRIKVSDAAAAIPREQGRALCRRVDMMV
DFEQTGWGSWIVYPKKYNAYRCEGLCPSPVDETFKPTNHAYIQSLLQLYKPNQVPCPACS
PVKMSPLSMLYYEKGEIVVRHHEDMIIEECGCN
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcccgctgcgctccgcgcccgcgctggcgctctgcaccctagccctgctccgc
ctgggctgcgcaccgacccgggcactcacctgggctccgaccagaacatccacccgggcg
ctcacctgggcaccgacctgggcaccggcccgcgccccgccgcgctgccccccgctgatg
ctgcagctgctccgcgcccctcccgccccgctccgcgccgccgccgccgccgctctcagc
ctctacccacacggctccctgcagaacggttcccgctgggctctctccttcgacatgtcc
tccctgtccagcagccaggaggtgagtctggctcagcttcgtgtccacctgcctggcctc
tcccatgcccacaacatctccctggacatctaccacagccagcggcgcaggtgccgggga
gatgggacctgctcccaccagctcttcctgggcaccgtggctggcagcccctctgccacc
caggcctcctggaaagtctttgaggtcaccaacctgctccgctcttggctccaccaagcc
gtggtcactgggcaccacagtcccacaggaagcgggcagtgggaggtgagtgggtcagct
gctccagccaccaccgccctgacagatgccgggcacagggatccagccctgccccaggat
gtcgcagacagagtcctgctgctcgtcttctccaaggacaagtctccgggagaccacagc
ctcatcaggacagcggagacctccaagtacataatgcgtgacagcagctcccggggcgag
ggaacgcggcggcagcgcaggaacaggatagagaagcaaaggatcaaagtgagcgacgct
gctgcggccatcccacgggaacagggcagggccctgtgccggcgggtggacatgatggtg
gatttcgagcagacgggctggggcagctggattgtctaccccaagaagtacaacgcctac
cgctgtgaagggctgtgcccctcgcccgtggatgaaaccttcaagcccaccaaccatgca
tacatacagagtttgctgcagctctacaagcccaaccaggtgccgtgtcccgcctgctcc
cccgtcaagatgagtcctctctccatgctctactacgagaagggtgagatcgtcgtccgc
caccacgaggatatgatcattgaggagtgtggctgcaactga
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