KEGG   Lichenostomus cassidix (helmeted honeyeater): 146428100
Entry
146428100         CDS       T12101                                 
Symbol
PCNA
Name
(RefSeq) DNA sliding clamp PCNA
  KO
K04802  proliferating cell nuclear antigen
Organism
lcai  Lichenostomus cassidix (helmeted honeyeater)
Pathway
lcai03030  DNA replication
lcai03410  Base excision repair
lcai03420  Nucleotide excision repair
lcai03430  Mismatch repair
lcai04110  Cell cycle
lcai04530  Tight junction
Brite
KEGG Orthology (KO) [BR:lcai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    146428100 (PCNA)
   03410 Base excision repair
    146428100 (PCNA)
   03420 Nucleotide excision repair
    146428100 (PCNA)
   03430 Mismatch repair
    146428100 (PCNA)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    146428100 (PCNA)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    146428100 (PCNA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcai03032]
    146428100 (PCNA)
   03400 DNA repair and recombination proteins [BR:lcai03400]
    146428100 (PCNA)
DNA replication proteins [BR:lcai03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    146428100 (PCNA)
DNA repair and recombination proteins [BR:lcai03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     146428100 (PCNA)
   MMR (mismatch excision repair)
    Other MMR factors
     146428100 (PCNA)
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    146428100 (PCNA)
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad1 Rad9 Hus1
Other DBs
NCBI-GeneID: 146428100
NCBI-ProteinID: XP_084936693
LinkDB
Position
22:complement(4246012..4249270)
AA seq 262 aa
MFEARLVQGSVLKRVLEALKDLITEACWDLGSGGISLQSMDSSHVSLVQLTLRSEGFDTY
RCDRNIAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSAEFARICRDLSHIGDAVVISCAKDGVKFSANGELGNGNI
KLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYK
IADMGHLKYYLAPKIEDQQEGS
NT seq 789 nt   +upstreamnt  +downstreamnt
atgttcgaggcgcggctggtgcagggctcggtcctcaagcgagtgctggaggccctcaag
gacctcattaccgaggcctgctgggatctgggctcgggcggcatcagcctgcagagcatg
gactcctcgcacgtctcgctggtgcagctcacgctacgctcggagggcttcgacacgtac
cgctgcgaccgcaatatcgccatgggcgttaacctgtccagcatgtccaaaatcctgaaa
tgtgcaggaaatgaagacatcatcaccctgcgagctgaggacaacgcagacaccttggcc
ctggtgttcgaggcaccaaatcaggagaaggtttctgattatgagatgaagctgatggat
ctcgatgtggagcagctgggaatcccagagcaggagtacagctgcgtggtgaaaatgccc
tcggcagagtttgcacgcatctgccgagacctgagccacatcggcgacgccgtcgtcatc
tcctgcgccaaggacggcgtcaagttctcggccaacggcgagctgggcaacggcaacatc
aaactgtcccagaccagcaacgtggacaaggaggaggaggctgttacaatagagatgaat
gagccagtccagctgacctttgccctgaggtacctgaacttcttcaccaaagccaccccc
ctgtcccctacagtcacactcagcatgtctgcagatgttcctctggttgtggagtacaag
attgctgacatgggacacttgaagtactacctggccccaaagatcgaggaccagcaggaa
ggctcttaa

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