Lichenostomus cassidix (helmeted honeyeater): 146428322
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Entry
146428322 CDS
T12101
Symbol
TNFRSF1B
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1B isoform X1
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
lcai Lichenostomus cassidix (helmeted honeyeater)
Pathway
lcai04060
Cytokine-cytokine receptor interaction
lcai04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
146428322 (TNFRSF1B)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
146428322 (TNFRSF1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
lcai04050
]
146428322 (TNFRSF1B)
04090 CD molecules [BR:
lcai04090
]
146428322 (TNFRSF1B)
Cytokine receptors [BR:
lcai04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
146428322 (TNFRSF1B)
CD molecules [BR:
lcai04090
]
Proteins
146428322 (TNFRSF1B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
146428322
NCBI-ProteinID:
XP_084935959
LinkDB
All DBs
Position
21:complement(4736302..4750252)
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AA seq
471 aa
AA seq
DB search
MGLSGELLLLLLLLGLGMIGAASGREYSLPYTPQFAECNDPSTEFYDEELNKCCSQCPPG
QYRTGSCSDTVDTKCSPCRPKTYTAIWNRSPQCFACSPPCRKGLVQNQTCTRSQDRICSC
PPHKYCVSKLDEYCEVCRTHRKCGKGFRVSRKGTESTDTECKPCPPGTFSPEESYSTSCT
PHTICKSVAVPGNSTNDTVCSDSGTATALPHAILNLLTHSSPSHKPEIITQPVILNSVPD
LSHITGAVAGPLLLLLIIALLGYCLVSKKKDLVYSAAATEADLPFPPPEKRCDKKVRDAE
LQNSRSSEQEQQHPLETSGSCSSILNNPTRLSSISLINKRNDVKKSPEGFQQHLLPEGSK
LHREDRHSSASSEHSGNGGTQVNVTCIVKVCSPDCNSQCPEQNNSTSRDYGNNPPHSPAG
EETPLSKEENDLKKGTEIHIAVENEDNLLQDLLPEEKKVPLGVQDAGMKTR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggggctgagcggggagctgctgctgctgctgctgctgctggggctggggatgatcgga
gcggcgagcggcagggaatactcattgccttacacaccacagtttgcagaatgcaatgat
cccagcactgagttctatgatgaagaacttaataaatgctgcagccagtgcccaccaggt
cagtacaggacagggagctgcagtgacactgtggacacaaagtgcagcccctgcagaccc
aaaacctacacagccatctggaatcgctctccacagtgctttgcctgctcaccaccctgc
aggaaagggctggtacagaatcaaacctgcacgaggtcccaggacaggatctgcagctgc
ccaccccacaaatactgcgtttccaagctggatgagtactgtgaggtgtgcagaacacac
agaaaatgtggcaaaggtttccgggtttccagaaaagggacagagagcacagacacagaa
tgcaaaccttgtcctcctggcacgttttcccctgaggaatcctacagcaccagctgtaca
ccccacaccatctgtaaatcagtggctgttcctgggaacagcacgaatgacactgtttgc
agtgactcaggaacagccacagctctgcctcacgccattttgaacctcctgacccacagc
tcaccttcccacaaacctgagatcataactcagcctgtcatactaaactctgtacctgac
ctgtcccacatcactggagcagtagcagggccattgttattgcttctgataattgctctt
ttggggtattgcttagtctccaaaaaaaaagaccttgtctactctgcagcagctacagaa
gcagatttgccttttccccctccagaaaaacgatgtgacaaaaaagtgagagatgcagaa
ttgcagaactccaggagctctgaacaggagcaacagcatcccttggaaacctctgggtcc
tgcagcagcatcctgaataatccaaccagattatcaagcatcagtctaataaataaaagg
aatgatgtaaagaaaagcccagaaggatttcagcaacatttacttccagaaggttctaaa
ctccacagggaagacagacacagctctgcgagttcagaacattctggcaatggaggaaca
caggtgaacgtgacgtgtattgttaaagtttgtagcccagactgcaactcccagtgccct
gagcagaataattcaactagcagggattatggaaacaatcctcctcattccccagcagga
gaagaaactcccctttcgaaagaagaaaatgacttgaaaaaagggactgaaattcacatc
gcagtggaaaatgaggacaatttacttcaagacttacttccagaagaaaagaaggttcct
ctgggtgttcaagatgctggaatgaaaaccagataa
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