Lichenostomus cassidix (helmeted honeyeater): 146429874
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Entry
146429874 CDS
T12101
Symbol
RAPGEF1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
lcai Lichenostomus cassidix (helmeted honeyeater)
Pathway
lcai04510
Focal adhesion
lcai04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
146429874 (RAPGEF1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
146429874 (RAPGEF1)
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Motif
Pfam:
RAPGEF1_N
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
146429874
NCBI-ProteinID:
XP_084933089
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All DBs
Position
17:4282108..4364198
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AA seq
1251 aa
AA seq
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MSWIILWKSACLFFIPVQLFAVSLCLPCLDSERSHLSSFTMKLKGKFHSPKIKRTPSKKG
KQADVTVKTPEKSVNKNVSWLEEKEKEVVSALRYFKTIVDKMAIDNKVLEMLPGSASKVL
EAILPLVQIDPRIQQSSAISSCYSRVYQSLANLIRWSDQVMLEGVNSEDKEMVTTVKDVI
KAVLDGVKELVRLTIEKQEHPSPTSPVKPSLPACKSDSPSELPLTDREMEILNKTTNMTQ
SNELLTDSMDEEVAPPKPPLPSIRVAENSPPPALPPKKRQSAPSPTRVAVVAPMSRATSG
SSLPVGINRQDFDVDCYAQRRLSGGSHSYGGESPRLSPCSSIGKLSKSDEQLSSLDRDSG
QCSRNTSCETLDQSDHYDPDYEFLQQDLSNADQIPQQVPGGPGILSPLPESLGESGSPFH
GHTFQLPQGSSSPLEFCSLSGAAQPTETPPALPEKKRRSAASQTLDNSGCRVSYERHPSQ
YDNISEDDLQNAVVVPSMPFTPFAAVLPFQQGNSSAPVEFIADFAAPDSNSDPEKPPPLP
EKKNKHMMAYMQFVEDYSEPQPSMFYQTPQNEHIYQKKNKYLREVYGINDSFISLDSSQE
LAPPPALPPKQRQLQASYAASSFSSVSYCVQQPKVPFTPEDCGATQGLTMSVSNSFLSRH
SSFPVHSYKSVFRSYSQDFVPHNQVSIPPFLSSTSSSCSTPPFPPVHPSQSPDLAVPTAA
SQSPSTVDVPNSSSQESSFNGNAPVCLPSETSFTDSLQTPSSENASEEAGEGEYVNLYSS
GQSNGELPRSEGESPPVKDGHSKDSPLNSSAMGKEGKDGAERQPQSPDTLESSQLEEEVD
ELSLIDHSEIMSRLTLKQEGDDGPDVRGGSGDILLVHATETDRKDLVLYCEAFLTTYRTF
ITPEELIKKLQYRYEKFCHFPDTFKKRVSKNTFFVLVRVVDELCLVELTEEILKLLMDLV
FRLVCSGELSLARVLRKNILDKVDQKKMLSYTNSIKPLAARGVAARPGTLHDFHSHEIAE
QLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDR
ERLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLAEYCTLIDSSSS
FRAYRAALADVEPPCIPYLGLILQDLTFVHLGNPDYIDSKVNFSKRWQQFNILDSMRCFQ
QVHYDIKRNDDIVSFFNDFSDHLAEEALWELSLKIKPRNITRRKTDREEKT
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggatcattttatggaaatcagcctgcctgttttttatacctgtacagctcttt
gcagtttctctttgtctgccatgcttagattctgagcgttcccatctctcctcgttcaca
atgaagttgaagggcaagtttcattcaccaaaaataaagagaacaccctcaaagaaagga
aagcaagctgacgtgacagtgaaaacaccagagaagtcagtgaacaaaaatgtatcatgg
ctagaggaaaaggagaaggaggttgtcagtgcattgcgctactttaagactattgtggac
aagatggcaattgataacaaggtattagagatgctgccaggctcagccagtaaagtgctg
gaagccatcctgcccttggtgcaaattgacccacgcatccagcaaagctctgccatctca
tcctgctacagccgagtgtaccagagcctggccaacctcatccgctggtctgaccaggtg
atgctggagggggtgaattcagaggacaaggagatggtgacaacagtgaaggatgtcata
aaagctgttctggatggagttaaggagctggtcagactcactattgaaaagcaggagcat
ccctctcccacaagcccagttaaacccagtttaccagcatgtaaatctgacagcccatca
gaacttccccttaccgaccgagaaatggagatcctcaacaaaacaactaatatgactcaa
tccaatgagctcctgactgactccatggatgaagaagttgcacctcctaaaccccctctg
cccagcattcgtgtggcagagaacagccctccaccagcactgccccctaaaaaacgtcag
tcagcaccttccccaaccagagtggctgttgtggcccccatgagtcgagctaccagtggg
tccagtttacctgttgggatcaacagacaggattttgatgttgactgctatgcccagagg
agattgtcaggtggaagccactcctacgggggggaatctcctcgcctctccccatgcagc
agcatcggcaaactgagcaagtctgacgagcagctgtcctccctggaccgtgacagtggc
cagtgctcccgcaacacaagctgtgaaaccttggatcaatcggatcactacgatccagac
tatgaattcctacagcaggacctctccaacgctgatcagatacctcagcaggtgccaggt
gggccaggtatcctcagcccattgccagagtccttgggtgagtctggctcccctttccat
ggacacactttccagctcccgcagggcagctcttctccactggaattctgcagcctctca
ggagcagcgcagccaacagagactcctccagctttgccagagaagaagaggaggagtgca
gcctcccagactctggataactctggctgcagggtgtcctacgagaggcacccttcccag
tatgacaacatctctgaggatgacctgcagaatgctgtggttgtcccatcaatgcccttc
acaccctttgctgctgttctgcctttccagcaaggaaactcttcagcaccagtggaattc
attgctgattttgctgctccagattcaaacagtgacccagaaaagccgccgcctctgcca
gagaagaaaaacaaacacatgatggcctacatgcagtttgtggaagattactcagagcca
cagccgtccatgttctaccagacccctcagaacgagcacatctaccagaagaagaacaag
tacctcagggaagtctacgggatcaatgactccttcatcagcttagactcctctcaagag
ctggcaccccctcctgctctcccacccaagcagcggcagctgcaggcctcctatgctgcc
tcttctttctcttctgtctcctactgtgtccagcaacctaaagtgcccttcacccccgag
gactgcggtgccactcagggcctcactatgtcagtctctaactcctttctcagccggcac
agctcctttcctgtgcactcgtacaaatctgtgtttaggtcctactcccaggactttgtg
cctcacaaccaagtctccatacctcctttcctctcttctacctcttcctcctgctccacc
ccgcctttcccgcccgtccacccatcccagagccccgacctagccgtgcccactgcagcc
agccagtcacccagcactgtggatgtgccaaactcctcttctcaggagagcagctttaac
gggaatgctcctgtctgccttccttctgaaacctctttcactgattctctccagacgcct
tcgagtgaaaacgccagtgaggaggctggtgagggtgaatatgtcaatctgtattcctct
ggccagagcaacggggaactccctcgctctgaaggagaatctcccccagtcaaagacggc
cactccaaagactcccctttgaacagcagtgccatggggaaggaaggcaaagatggtgct
gaaaggcagccacagtcaccagatactttggaatcatcacagctggaggaagaggtagat
gagctgtcccttattgaccacagtgaaatcatgtctagattaacactgaagcaagagggg
gatgatggccccgatgtccgtggtggatccggagacatcctgttggtgcacgccacagag
accgacaggaaagatctggtgctgtactgtgaagcctttctgactacatacaggacattt
attacccctgaagagctcatcaagaagctgcagtacagatatgagaagttttgccacttc
ccagacacgttcaagaagcgagtcagtaagaacaccttcttcgtgctggtgcgagtggtg
gatgagctgtgcttggtggaattgacagaggaaattctcaagctgctgatggacctggtg
ttcaggctggtgtgcagtggggagctgagcctggccagagtgctgcgcaagaacatcctg
gacaaagtggatcagaagaaaatgctgagctacaccaactccatcaaacctctcgcagcc
cgaggggtggcagccaggccagggacactgcatgatttccacagtcatgaaatagcagag
cagctgaccctgctggatgctgaactcttctataaaattgagatcccagaagttttgctt
tgggcaaaggaacaaaatgaagagaagagccccaacctgacacagttcacagagcacttt
aataacatgtcctactgggtccgttcaataattatgctacaagagaaagcccaggaccga
gagaggctgctccttaaatttataaagattatgaagcacttacgaaagctgaataatttt
aattcctatctggccattctttctgcactggattctgcacccatccgaaggctggagtgg
cagaagcaaacctcagagggcctggctgagtactgcacgctgatcgacagctcctcgtcc
ttccgcgcctaccgagcagccctggctgatgtggagcctccctgcatcccctacctaggc
ctgattctgcaggacctgacctttgtccatctgggaaaccctgattacattgacagcaaa
gtgaacttttccaagcgctggcagcagtttaacatcctggacagcatgaggtgcttccag
caagtacattacgacatcaaaaggaacgatgacatcgtgtcattcttcaacgacttcagc
gaccacctggccgaggaggccctgtgggaactgtccctgaaaatcaaacctcggaacatc
acgaggcggaaaacagatcgggaagagaaaacctag
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