Lichenostomus cassidix (helmeted honeyeater): 146431260
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Entry
146431260 CDS
T12101
Symbol
CSF1R
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
lcai Lichenostomus cassidix (helmeted honeyeater)
Pathway
lcai04010
MAPK signaling pathway
lcai04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
146431260 (CSF1R)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
146431260 (CSF1R)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcai01001
]
146431260 (CSF1R)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lcai04090
]
146431260 (CSF1R)
Enzymes [BR:
lcai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
146431260 (CSF1R)
Protein kinases [BR:
lcai01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
146431260 (CSF1R)
CD molecules [BR:
lcai04090
]
Proteins
146431260 (CSF1R)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
VEGFR1-3_N_Ig-like
Ig_2
Ig_PDGFR_d4
Ig_VEGFR-1-like_5th
Ig_6
Ig_5
Ig_4
VEGFR-1-like_Ig-like
APH
Motif
Other DBs
NCBI-GeneID:
146431260
NCBI-ProteinID:
XP_084929834
LinkDB
All DBs
Position
13:complement(12067728..12088286)
Genome browser
AA seq
970 aa
AA seq
DB search
MGPALLLLLLATAGFWRGSASPVISPDLPTLVVNTGDPVILHCSGESEVAWNSKKYTFSN
HTTSTLSIPTATYRNTGTYICAYVNSSDKGIAAIHLFVRDPDNVWYTPDFRIRGIEGGNV
DLPCLITAPEYGSNVTLVMGDASPLPPGTNYSFSAEKGVTLYNVQSKHKGSYRCQAQING
RIKSSPRIRLVMEEALEKPVSVMMDPMDHVRIVGEPFQVTCRVIAPSHKYDIRWVTAAKT
VMRTKKIDFENDNYFINDTLSIPAVTMEDTGKYVCIANNSVGFRNASTMLQVVERGYVYL
MPEQATSQEVALGESLKLQIHIKAYPKLLHWVWEHTNPLKSSGTTTIIHSQMLSGNNWYN
NTLFLNRLKEGEGGFYTFHALNNVTNQSVTFSISLKSSPRVCRIKVPANDSSILQCMAIG
YPAPRIEWYQCPVHSDRHSEDYRLIRNDSRPQVVNMLPFQEVEVESTILFQELGDNFTFC
CVAINGEGNASDMLHSLTITRSVMALPNKLFSPVLSTCIGALVLLLLLLLFLLYKYNQKP
KYQVRWKIIEACEGNNYIFIDPTQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGL
GKEDSVLKVAVKMLKSSADTDEQEALMSELKIMSHLGHHENIVNLLGACTCGGPILVITE
YCRYGDLLNFLRKKAESIIIQDSALDTSLDSAADYKNIELEKKYIRSDSGFSSQGLETYV
EMRPVSSSSSSAASDSAQVRGRSSEEEDEAREDLRPLNLSDLLQFSSQVAQGMAFLASKN
CIHRDLAARNVLISDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCIYT
VQSDVWSYGILLWEIFSLGKSPYPGMVVNSKFYSMVKQGYQMARPDFAPLEMYSIMQACW
SLEPTRRPTFDQIGCFIQKELEVHKEQDYTNLPSSAEEDSGCDTSGCCEESCDQEESGQP
LLKGNNYQFC
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctgctctcctgctgctgctgctcgccacagctggcttctggcgtggctcagca
tctccagtgatcagccctgatctccctaccctggttgtcaacacgggtgatcctgtcatc
ttgcactgctcaggagagtctgaagttgcatggaatagcaaaaagtatacattcagtaac
cacaccaccagcactctcagtattcctacggccacttacaggaatacaggcacctatatt
tgtgcttatgtcaacagcagtgacaagggcattgcagccatccacctgtttgtgcgagat
cctgataacgtgtggtacaccccggatttccggatccgggggattgaaggtgggaatgtt
gatctcccctgtctcatcacggcccctgagtatggatccaatgtgactctggtcatgggt
gatgcctctcctctcccacctggcaccaactactccttcagtgctgagaaaggagtaaca
ctgtacaatgtgcaaagcaagcataaaggttcttaccgatgccaagcacagataaatgga
agaataaagagttcaccaagaataagactggtcatggaagaagcactggagaagcctgtg
tcagtgatgatggaccctatggaccacgtgcgaatcgtgggggaacctttccaagtcacc
tgcagagtgattgctccttcccacaagtatgacatcagatgggtgacagcagcaaagaca
gtcatgagaactaaaaagattgactttgaaaatgataactacttcatcaatgacaccctg
tccatcccagcagtgactatggaagacactgggaagtatgtctgtatagctaacaattca
gtaggattcaggaatgcctcaacaatgcttcaggtagtagagagaggttatgtgtacctg
atgccagagcaagccaccagccaggaggttgctctgggagagagtttgaagctgcagatc
cacattaaggcttaccccaaacttctccactgggtctgggaacacacaaatcccttgaag
agctctgggaccaccacaatcattcatagccaaatgttgtctggaaacaactggtacaac
aacacgctcttcctgaaccgcctgaaggagggagagggaggattctacacgtttcatgcc
ctcaacaatgtgaccaatcaatcagttaccttcagtatatctctgaaatcttctccaagg
gtgtgcagaatcaaggtgccagccaatgactccagcatccttcagtgcatggccattggg
taccctgccccacgcattgagtggtaccagtgccctgttcattcagacaggcacagtgag
gactacagactgatacggaatgactccagaccccaggtggtgaacatgttgcccttccaa
gaggtggaggtggagagcaccatcctcttccaggagctgggtgacaatttcaccttctgc
tgcgtggccattaacggggaagggaatgcctcagacatgcttcactcgctcaccatcacc
aggagtgtcatggcccttccaaacaagctcttcagccctgttctctccacctgcataggc
gcattggtgctgctgctcctcctactccttttcctgctctacaagtacaaccagaaaccc
aagtaccaggtgaggtggaagatcattgaggcctgtgaagggaataactacatctttatc
gatcccactcagctgccatacaatgaaaaatgggagtttcccaggaataacctccagttt
ggaaaaactcttggagcaggagcctttggaaaagtggtagaagcaacagcttttgggctg
ggcaaagaagattcagtgctcaaagtggctgtgaagatgctgaagtcttcagcagacaca
gatgagcaggaggcgctcatgtctgagctgaagatcatgagtcacttgggacaccacgag
aacattgtcaacctgctgggggcatgtacctgtggaggcccaatccttgtcatcaccgag
tactgtcgctatggagatctgctgaatttcctgcggaagaaggctgaatccataattatc
caggattctgccctggacacctctttagatagtgctgctgattacaaaaacattgaacta
gagaaaaaatacatccgcagcgacagtggcttttcaagccagggtttggaaacatatgtt
gaaatgaggcctgtgtcgtcatcatcatcttcagcagcatcagattctgcgcaagtcagg
gggagaagctcagaagaagaagatgaagccagggaggacctgcggcccctcaatctctct
gacctgctacagttctctagccaggtggcccagggcatggcattcctcgcatcaaagaac
tgcatccaccgtgacttagcagccaggaatgtgctcatatcagatggacgggtagccaag
atctgcgactttggcctggcccgggatatcatgaatgactccaattatgttgtgaaaggc
aatgcccgcctgccagtgaaatggatggctccagagagcatctttgactgcatttacaca
gtgcagagtgatgtgtggtcttacggcatcctgctctgggagatcttctcccttgggaaa
agcccgtatcctggcatggtggtgaacagcaagttctacagcatggtgaagcagggatac
cagatggccaggcctgactttgctcctttggaaatgtacagcatcatgcaggcatgctgg
agcctggagcccacacggagacccacctttgaccagatcggctgcttcatccagaaagag
ctggaggttcataaggagcaggactacaccaacctcccctccagtgctgaggaagacagt
ggctgtgacacttctggctgctgtgaggagtcctgcgatcaagaggagagtgggcagccc
ctcctcaagggcaacaactaccagttctgttag
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