Lichenostomus cassidix (helmeted honeyeater): 146433858
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Entry
146433858 CDS
T12101
Symbol
PTGFR
Name
(RefSeq) prostaglandin F2-alpha receptor isoform X1
KO
K04262
prostaglandin F receptor
Organism
lcai
Lichenostomus cassidix (helmeted honeyeater)
Pathway
lcai04020
Calcium signaling pathway
lcai04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
146433858 (PTGFR)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
146433858 (PTGFR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcai04030
]
146433858 (PTGFR)
G protein-coupled receptors [BR:
lcai04030
]
Rhodopsin family
Lipid
Prostaglandin
146433858 (PTGFR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
Serpentine_r_xa
AF_0924
CyanoTRADDas_TM
Motif
Other DBs
NCBI-GeneID:
146433858
NCBI-ProteinID:
XP_084924027
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Position
8:11588006..11613190
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AA seq
364 aa
AA seq
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MNSSKSPGLAGFGVLKNTTCHTEKKISVFFSIIFMTVGILSNSLAIVILMKAYQRFRQKS
KASFLLLASGLVVTDLFGHLINGAIAVFVYASDKDWIRFNQSNILCSVFGICMVFFGLCP
LFLGSVMAVERCIGVTKPIFHSTKMTSRHVKMMLTMVCLFAVLIALLPILRFRAYQIQAS
RTWCFYKTEHVEDWEDRFYLLLFSCLGFLALAISFLCNAVTGITLLRVKFKSQQRQGRSH
HFEMIIQLLAIMCVSCICWSPFLVTMATIGINEGRSKETCETILFALRMATWNQILDPWV
YILLRKAVLKNLYKITSGCCGVHVINLHMWELSSIKNSLKVAAISESPGGSKQMNLQPLT
SMGQ
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaacagttcaaaatcaccaggtctggctggatttggagtcttgaaaaacacgacgtgc
cacacggagaaaaagatttcagttttcttttcaataatcttcatgacggtgggaattttg
tccaacagtcttgcaatagtaattctcatgaaggcataccagagattcagacagaaatca
aaagcctcctttttgcttcttgccagtggtttggttgtcacagatctctttggtcacctc
atcaatggagccattgcagtgtttgtgtatgcatcagacaaagactggattcggtttaac
cagtccaacattctttgcagtgtttttggcatctgcatggttttctttggtttgtgccca
ctcttcctgggcagtgtgatggctgttgaacggtgcattggagtcactaagccaatattt
cactctacaaaaatgacttctagacatgtgaaaatgatgttgactatggtatgtctgttt
gctgttcttatagctttgctgcctattcttaggtttagagcctaccaaattcaagcatcg
aggacctggtgcttctataaaacagaacatgttgaggactgggaagacagattttatctc
ttacttttttcttgccttgggttcctggcccttgctatttcattcctgtgcaatgctgtc
acaggaattaccctcttaagagtcaaatttaaaagtcaacaaagacaaggcagatcgcat
cattttgaaatgatcattcagctcttggctataatgtgtgtttcttgcatttgctggagt
ccattcctggtgaccatggccacaattgggatcaatgaaggtcgctcaaaggagacctgt
gaaaccatacttttcgctctccgcatggccacgtggaaccagattttggatccctgggtg
tacattctcctccggaaggcagtgctcaaaaacctgtacaagatcacgagtggatgctgt
ggcgtgcacgtcataaacttacacatgtgggagctcagctccatcaagaattctctgaag
gttgcagcaatctctgagtcaccaggaggttccaagcagatgaacctgcagcctcttacc
tccatgggacaataa
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