Lichenostomus cassidix (helmeted honeyeater): 146438095
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Entry
146438095 CDS
T12101
Symbol
LRIT3
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
lcai Lichenostomus cassidix (helmeted honeyeater)
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcai04990
]
146438095 (LRIT3)
Domain-containing proteins not elsewhere classified [BR:
lcai04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
146438095 (LRIT3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
Ig_2
LRR_1
fn3
LRR_5
ig
LRR_14
V-set
LRR_6
FN3_DSCAM-DSCAML_C
Ig_VEGFR-1-like_5th
C2-set_2
LRR_9
Pur_ac_phosph_N
LRR_EndoS
VEGFR1-3_N_Ig-like
Afaf
Motif
Other DBs
NCBI-GeneID:
146438095
NCBI-ProteinID:
XP_084914510
LinkDB
All DBs
Position
4:25365364..25380589
Genome browser
AA seq
685 aa
AA seq
DB search
MATFTFVAHCTRVPRNKAFTFFSCQFFWEEAMYLFIYFYLLISFFEEVYGFCPSQCTCVY
HGRSDGTGTRSVLCNDPDMYEIPVNVPVDTVKLRIEKTVIRRIPTEAFYYLVDLKYLWVT
YNCIANIDISSFYNLKQLHELRLDGNLLSTFPWESLAEMPNLRTLDLHNNKVTSIPADAG
RYLRNLTYLDLSSNKLTTLPSDLMDIWPPFSGAIVSKNTDILVTQRVILGFQDNPWFCDC
RISKLIEFSKIVDTSVVLLDPLVSCSGPESLAGILFQRAELEQCLKPSVMTSATKITSPL
GSNVLLRCDATGYPTPQLTWTRSDNIPVNYTVIQETPGEGVRWSIISLTGISYKDAGEYR
CKAKNLAGMSEAAVTVTVVGVVTTTVSPQKYGRKPEAERQNTTQEESKQEPERTTTPLST
TPNSTALVSTERSTSMTFADKKQSRLMLDGKKISKAVTNANKKQAGDLRKKGEDTSVNAA
GMAQQNVTVQNLRVISETDERVTLTWKTVNATGNSAVTVLYSKYGEKDMLPLSTDSNKNK
VTIDGLQPSTQYMACVSPKGVPPTKEQCVVFSTDGLNDESNSEFSILIVASSAACVVALP
LIFFLLYKVLKLHLKPKSAKEADLAKETYVKFETLSLKPQTVSARDQLWARRYTDESERL
LLCSRSSMDSQMTFKSEGSRSEYLC
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggctacattcacattcgtagcacactgcacacgagtgcctaggaataaagctttcaca
tttttttcatgtcagttcttctgggaggaagccatgtatctatttatttatttctacctc
ctaataagtttttttgaagaagtttatggcttttgtccttcacaatgcacttgtgtttac
catggcagaagtgatggcactggaacaaggtctgtgctctgtaatgatcctgacatgtat
gagatccctgtgaatgttcctgtggatactgtgaaacttcgaatagagaaaactgtcatc
cggaggattccgacagaagccttttactacctggtggatctcaaatacctgtgggtcact
tacaactgcattgccaacattgatatcagcagtttctataacctgaaacagctgcacgag
ctgaggctggatggtaatctgctctccactttcccttgggaatccctggcagagatgccc
aacttacggactctagatctgcacaacaacaaggtgaccagcattcccgctgacgctggc
cgctacctgaggaacctcacctacctggacttatccagcaacaagctgaccaccttgccc
tcagacctcatggacatttggccccccttctcaggagctatcgtgtccaagaacacagac
attttggtgacacagagagtaattttgggttttcaggacaacccatggttttgtgactgt
cgcatttcaaagctgattgaattttccaaaattgtggacacctctgttgtacttcttgat
ccgttggtttcatgtagcggacctgagagcctggcaggaatcttgttccagagagctgag
ttagagcagtgtcttaagccatccgtgatgacatcagcgacaaagatcacctccccgctg
ggcagcaacgtcctgctgcgctgcgacgccacggggtacccaacgccacagctcacctgg
actaggtcagacaatatcccagtgaactatacagttattcaagaaactcctggagagggt
gtcagatggtccataataagcttgacaggaatttcatacaaggatgctggagaatacaga
tgtaaagccaagaacttggcaggaatgtccgaagctgctgtgacagtcacagtggttggt
gtggttactacaactgtgtcaccacagaagtatggaaggaagccagaggctgagaggcag
aatacaacccaggaggaatccaagcaggaacctgagaggacaaccacacctctttccacc
acaccaaactccacagctctggttagcactgaaagatcgaccagcatgacgtttgctgac
aagaagcaatccaggctcatgttagatggaaagaaaatttcaaaggcagtgacaaatgca
aacaaaaagcaggctggagatttaagaaagaaaggtgaggacacttcagtgaacgcagca
ggtatggctcagcaaaatgttactgtgcagaatctaagagtcatcagtgaaaccgatgaa
agagtgaccttaacttggaaaactgtcaatgccacaggcaattccgctgtgactgtgtta
tactccaagtatggtgagaaagatatgttgcctctaagcacggattctaataaaaacaaa
gtcacaattgatggtttgcaacctagtactcaatatatggcctgtgtctcacccaaaggt
gtgccacctaccaaagaacagtgtgttgttttttccaccgatgggttaaatgatgaaagc
aactctgagttttctattctgatagtggccagcagtgcagcatgcgtggttgctttacct
ttgatatttttcttgctctacaaagttttaaaacttcatttgaaaccaaaatctgcaaag
gaagctgaccttgcaaaagagacttacgtgaaatttgaaacgctatcgctgaagcctcaa
acagtgagtgcaagagaccagctctgggcacgaaggtacacagacgagtcagaaagactt
ctcctttgctctaggtcaagcatggattctcaaatgaccttcaaaagtgagggctccagg
tctgagtatctgtgctga
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