Lichenostomus cassidix (helmeted honeyeater): 146439072
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Entry
146439072 CDS
T12101
Symbol
PEX6
Name
(RefSeq) peroxisome biogenesis factor 6 isoform X1
KO
K13339
peroxin-6 [EC:3.6.4.-]
Organism
lcai
Lichenostomus cassidix (helmeted honeyeater)
Pathway
lcai04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
146439072 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcai04131
]
146439072 (PEX6)
Membrane trafficking [BR:
lcai04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
146439072 (PEX6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DPBB_PEX6
PEX6_vert_N
AAA_16
AAA_lid_3
AAA_5
AAA_22
Mg_chelatase
nSTAND3
PEX6_4th
nSTAND_NTPase5
RuvB_N
AAA_25
Vps4_C
NPHP3_N
RNA_helicase
AAA_33
bpMoxR
DUF815
TIP49
Parvo_NS1
AAA_28
IstB_IS21
AAA_14
AAA_24
Motif
Other DBs
NCBI-GeneID:
146439072
NCBI-ProteinID:
XP_084910637
LinkDB
All DBs
Position
3:11485085..11499620
Genome browser
AA seq
975 aa
AA seq
DB search
MAVAVLRPLDAPPAELCPATALLLAPAGLCAALRGRGGALVLAVRPAGRGGAQPVLLSAV
ALEAGGRRGAELWLRGALLRRLGLAAGRRVAVWPVRRPPALAWVLLGAAGRAGRLAGGAV
LARRGEALPGPGPGPGPLVLEARPALQGLLGSGTRTALAPPPPPPAPPGTARGRPPPAAA
PPLVSRFAVAAAGPRLRAVPGGAGGGGGAEVWVSRRGLLALGLFQGEWVRVGAEGAAREH
LAALLARPPPWEYPRAARRGLADGTALLAPALAFNLGCDPAAAAHLRLQRYERTGAADGK
GSRSVLSVPPFARELHLQIVCSPAYSTLGSYDHVLYRHFETPRLVQEGDILCVPTFGNAE
FIELNADKFLRWPELYFKVKKVVGMVEGEQSEGYLVDTQNTSLYLVGSTNSTVPSAPAYN
SNEFWSSLSPAGLSDVVKQLCDALRPHLSCRANALSSVGSVLLSGPSGSGKLMAVRAVCS
CLNLHLFKVDCVSLCSDTSAATEERVQVAFTQAQQYQPCVLLLKDIEVLGRDRDGLGEDA
RVIATLRQLLLDRDPAQSSHPVLVIGTTCKPQNVPTDVQTAFLHEVKIEAPSEEQRRLML
SMLTASLPLGKEVSLSKLARRTAGFVLGDFCALLSHSSRAAVTRIQALSFPGGLSEEVER
DFCTAGFPVLEEDFSAALDQLHDAHSQAVGAPKIPSVSWQDVGGLQEVKKEILDTIQLPL
EHPELLSLGVCRSGLLLYGPPGTGKTLLAKAVATTCAMTFLSVKGPELINMYVGQSEENV
RNVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTREVFVI
GATNRPDLLDPALLRPGRFDKLVYVGISEDRESQLQVLSAVTRKFKLDPSVNLTTILEKC
PAQLTGADIYALCSDAIMCAVKRKVEWIEEGLDTESSALILTMEDFLQAAARLQPSVSEQ
ELLRYRLIQQKFAAC
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgctgcggccgctggacgccccgccggccgagctgtgtccggccacg
gcgctgctgctggcgccggcggggctgtgcgcggcgctgcgcgggcggggcggcgcgctg
gtgctggcggtgcggccggcggggcgcggcggggcgcagccggtgctgctgagcgccgtg
gcgctggaggcgggcgggcggcgcggcgcggagctgtggctccgcggggcgctgctgcgg
cggctggggctggcggccggccggcgggtggccgtgtggcccgtgcggcgcccgccggcg
ctcgcctgggtgctgctgggggcggcggggcgggcggggaggctggcgggcggcgcggtg
ctggcgcggcggggcgaggcgctgccggggccgggcccgggcccgggcccgctggtgctg
gaggcgcgcccggcgctccaggggttgctgggcagcgggacgcgcaccgccctcgctccc
ccgccgccgccgcccgccccgccgggcaccgcccgcggccgcccgccccccgccgccgcg
ccgcccctcgtctcccgcttcgctgtcgccgccgccggcccgcggctgcgtgcggtgccc
ggcggggccggcggcggcggcggggcggaggtgtgggtgagccggcgcgggctgctggcg
ctggggctgttccagggcgagtgggtgcgggtgggcgcggagggagcggcccgggagcac
ctggcggcgctgctggctcggccgccgccctgggagtacccgcgggccgcccgccgcggc
ctggccgacggcaccgcgctgctcgccccggccctggccttcaacctgggctgcgacccc
gccgccgccgcccacctccgcctgcagaggtacgaaaggaccggcgccgcggatgggaag
ggcagccggtccgtgctgtctgtgcccccgttcgccagggagctgcacttgcagatcgtc
tgctcgccggcctacagcaccctgggaagctacgaccatgtgctctacaggcacttcgaa
acgccacggctggtccaggagggagacattctttgtgttccaacatttggaaatgctgag
tttatagaactaaatgcagacaagttcctaaggtggccagagctttatttcaaggtgaag
aaggttgtaggcatggtggaaggcgagcagtctgagggttacctggtggacacccagaac
acttctctctatctggtgggttcaacgaacagcactgtcccatctgccccagcctataac
agcaatgagttctggagcagtttgtctcctgcaggactttctgacgtcgtgaaacagctc
tgtgatgctcttcggcctcacctgagctgtagggcaaatgcactgagcagcgtgggcagc
gttctcctctcggggccgagcggcagtgggaagctgatggctgtcagagctgtgtgtagc
tgcctcaacctccacctcttcaaggtcgattgcgtcagtttgtgcagtgacaccagtgca
gccacagaagagagagtgcaggtggccttcacccaggcccagcagtaccagccctgtgtg
ctcctgctgaaagacattgaagtgcttggcagagaccgagacgggctcggagaggatgcc
agggtcattgctactctgaggcagctgctcctggacagagacccagcacagagcagccac
cctgtcctggtgattggcacaacctgcaagccccagaatgttcctacagatgtgcagact
gctttccttcatgaggtgaagatcgaagccccttcagaggagcagaggaggttgatgctg
agcatgctgactgccagcctgcctctgggcaaagaagtgagcctgtccaagctggcccgc
aggactgccggttttgtgctgggagatttctgtgccttgttgtcccacagcagccgcgct
gctgtcacccgaatccaggccttgagttttccaggtggactgagtgaagaagtggagagg
gatttttgcactgctgggttcccagtgcttgaggaagattttagtgctgcactggaccag
ctgcatgatgcccactcacaggcagtgggagccccaaagatcccctcagtgtcctggcaa
gacgttggtgggctgcaggaggtgaagaaggagatcctggacactatccagttgcccctg
gagcacccagagctgctgtcactgggtgtgtgccgctctggtctgctgctgtacgggcct
ccagggacagggaagaccttgttggcaaaagctgtggcaacaacgtgtgccatgacattc
cttagtgtgaaagggccagagctcatcaacatgtacgttgggcagagcgaggagaacgtg
cgcaatgtgtttgccagagccagggcagctgctccctgcattatcttctttgatgaactg
gattccctggcccccagtcgtgggagaagtggagattcagggggtgtcatggacagagtt
gtctcacagctcctcgcagagctcgatggccttcattccaccagagaggtgtttgtcatt
ggagccaccaacaggcctgacctcctggacccagctctgctacggccaggcaggtttgac
aagctggtctacgtgggcatcagcgaggaccgggagtcgcagctgcaggtgctgagtgct
gtcaccaggaagtttaaactggatccttctgtgaatctcaccactatcctagaaaaatgc
ccagctcagctgacaggagcagacatctacgccctgtgttcagatgccataatgtgcgct
gtcaaacgcaaggtggaatggatcgaggaagggctggatactgagagctctgctctgatc
ctgaccatggaagactttctgcaggctgctgccaggttgcagccgtcagtctctgagcag
gagctgctcaggtacagactcatccagcagaagtttgcggcctgctaa
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