Lichenostomus cassidix (helmeted honeyeater): 146443970
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Entry
146443970 CDS
T12101
Symbol
LCMT2
Name
(RefSeq) tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
lcai Lichenostomus cassidix (helmeted honeyeater)
Brite
KEGG Orthology (KO) [BR:
lcai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcai03016
]
146443970 (LCMT2)
Enzymes [BR:
lcai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
146443970 (LCMT2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
146443970 (LCMT2)
Transfer RNA biogenesis [BR:
lcai03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
146443970 (LCMT2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LCM
Beta-prop_FBX42
Beta-prop_TYW4
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_1
Kelch_HCF
Glyoxal_oxid_N
Motif
Other DBs
NCBI-GeneID:
146443970
NCBI-ProteinID:
XP_084920631
LinkDB
All DBs
Position
1:complement(45090..64085)
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AA seq
684 aa
AA seq
DB search
MGRARPRAASDPRAVQGTGGSSAVSKCSAAARGYIQDRFLRLLAGRRRRRAPLIHRGYYI
RARAVDHCVQDFLLKTQSLPRTQILSLGAGFDSLYFRLKDMGLLHHTVVYEVDFPNVACQ
KATLIKRMKELSALVGDTGEEILGAVMFSGEDYKLLGADLSELSELERALEEAGLDNEIP
TLFIAEVVLTYMENTRSDALIQWAAEHFPQACFLVYEQVHPGDPFGRVMQQHFSQLNSAL
HSLAQYPDCEAQQRRFLGKGWTECSVMDMNEFFTCCIPEDEQQRVQTLEPFDEYEEWHLK
CSHYFVLAASKGMEPSWTPLLSSVTVPRHAGPVGMAGSVPAAVCAGLSGIPGLRRYGHHS
LLIKPNMILTTGGFGEEYGQHCRMRNFHVLSKHAGYWKAVCVTQNIPDKRWGERLYHTVS
CLSDTLALVVGGRTSPSSAGLGMLWLKFPKTCNTSDPDHIAVEPVSLQPAAEATALRWRH
SVTETTFKGEQYLFVYGGRSALEPVLGDWYFLHTRELSYTVIAVEGPVPESRHSHSACSW
EGGVLIAGGLGAAEQPLGSVFLLRELEHGFQWQTIETHPPLIPRYSHTAHVHDGKLLLVG
GVWLHASSVPGITVIDLMTGLCLDYVINVEHLEWPLMLHNHSSVFLPDEKELLVVGGGGN
CFSFGTHLNPQPVLLSLSSILISH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtgcgcgtccccgtgccgccagtgacccccgcgccgtccagggcactggcggc
agcagcgcagtcagcaagtgctcggcggcagcgcggggctatatccaggaccggttcctg
cggcttctggcgggacggcggcggcggcgagcgccgcttatccaccggggttattacatc
cgcgcccgcgctgtagatcactgtgttcaggacttcctgctgaagacacaaagcctacct
aggacacagatcctgtctttaggtgctggctttgattctttatacttccgtttgaaggat
atgggtcttctgcatcatactgtggtatatgaggtagatttcccaaatgtggcatgccaa
aaagctactctgatcaaaagaatgaaagagttatcagcactggtgggagacactggagag
gaaatattaggagctgttatgttttctggagaggattataaattactgggagcagattta
tcagagctgtctgagctggagagagccctggaggaagcaggactggacaatgaaatcccc
accctcttcattgcagaggtggtgctcacctacatggagaacaccagatcagatgccttg
attcagtgggcagcagagcatttccctcaggcatgctttctggtgtatgagcaggtgcac
ccaggggacccctttggacgtgtcatgcagcagcatttcagccagctgaactctgcactt
cactcgctggcacagtaccctgactgtgaggcacagcagaggcgctttctgggaaagggg
tggactgagtgcagtgtcatggatatgaatgagtttttcacctgttgtattccagaagac
gagcagcaaagagtgcagactctggagccttttgatgagtatgaggaatggcatctgaaa
tgttctcattattttgtgttggctgcatcaaaggggatggaaccttcctggactccgttg
ttatccagtgtgacagttcctcgtcatgctggtcctgttgggatggctgggagtgtccct
gcagcagtatgtgcagggctctcaggaattcctggcctgagacgttatggtcaccactct
cttctcataaaacccaacatgattctcaccacgggaggctttggggaggagtatggacag
cactgccgcatgagaaatttccatgtgctcagtaagcatgcaggctactggaaagctgtc
tgtgtgacacagaatattcctgataaaagatggggtgagaggttgtaccatactgtgtct
tgtctgtcggacactctggccctggtggtaggaggacgaacatccccatcgagtgcaggc
ttgggaatgctgtggctaaagttccccaaaacctgtaatacttcagacccagatcacatt
gctgtggagcctgtaagtctgcagcctgctgctgaagcaacagctttgcgttggaggcac
agtgtaactgaaacaacattcaaaggtgagcagtacctgtttgtgtatggtggccgctct
gctctggagcctgtgcttggggattggtatttcctgcacactcgagaactctcctacact
gtgattgctgttgagggtccagtcccagaaagccgccactctcacagtgcctgcagctgg
gaaggaggagtgctgatcgcaggaggtctgggagcagctgagcagcccttgggttcagtt
ttccttctaagagagcttgaacatggctttcagtggcagacaatagagacacaccctcct
cttatcccaaggtattcacatactgcacatgtgcatgatggaaagcttctgctcgttggt
ggggtgtggttgcacgcatcctctgtgccaggcatcactgtcattgacttaatgactggt
ctctgcttggactatgtgattaatgtggagcatctggagtggccgttaatgctacataat
catagcagtgtctttctgccagatgagaaggagttgttggttgttggtggtggtggaaac
tgcttctcctttgggacacacttgaacccacagcctgtcttgctgagcctcagcagcatc
ctgatcagccactga
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