Leptogranulimonas caecicola: ATTO_00060
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Entry
ATTO_00060 CDS
T08581
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lcal
Leptogranulimonas caecicola
Brite
KEGG Orthology (KO) [BR:
lcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcal03032
]
ATTO_00060 (gyrA)
03400 DNA repair and recombination proteins [BR:
lcal03400
]
ATTO_00060 (gyrA)
Enzymes [BR:
lcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ATTO_00060 (gyrA)
DNA replication proteins [BR:
lcal03032
]
Prokaryotic type
DNA Topoisomerases
ATTO_00060 (gyrA)
DNA repair and recombination proteins [BR:
lcal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ATTO_00060 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
PUA_4
Motif
Other DBs
NCBI-ProteinID:
BDC90134
UniProt:
A0AAU9C9L2
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All DBs
Position
6948..9794
Genome browser
AA seq
948 aa
AA seq
DB search
MADNKRPGDGGFDDELDSGVNEGDLFEDDEVREGAVGPNDDVELDDPEDSSDSDDNIDYD
LTVEEDGDEMGVELDSIGDSTTGLLADEGGSRLDLTDIHGGTLKPIDLPSEMQTSFIEYS
MSVIVARALPDVRDGLKPVHRRILYAMLDSGVLPTKPHKKSAWTVGEVIGKYHPHGDSAV
YDAMVRLAQDFSMSVPLIDGHGNFGSVDGDPAAAMRYTESRLAKPAMELLRDLNDDTVDW
QPNYDESIMEPAVLPSRFPNLLVNGSSGIAVGMATNITPHNLGEAIDATCMMIDNPDATV
DELMSVMPGPDFPTGAVIMGAEGIRDSYETGRGSICVRAKAHVEKIKGNRQRIVITEIPY
QVNKGLLQEKIAKLVNDKVIEGISDMRDETNRKGMRLVIDLKTNVVPEVVLNNLYKHTQL
QTTFGAINIALVDGVPKTLTLREMIGHYIDHQVDVVTRRTQYRLKKAQKELHVREGLLIA
VDNIDEVVHIIRSSYSDAEVRERFNERFGLDEVQSNAILEMRLKRLTGLEREKLVADIER
LKEEIAYLESLLADRTKLLGVIKDEMREIKDKYARPRRTTISNAPITLNVEDLIADEDMV
ITITHAGYIKRTPVADYRSQKRGGKGVQGVSLKDNDFVEELFVASTHDYILFFTNLGKVY
RLKVHELPVGSRTAKGTPLVNLLDLADGEHATSVFTTSDFPESEYLMFATAKGNVKKTAL
SAYDRTRRDGMIAIKLNEGDQLVTVRRVKAGEKVILTSSAGKTILFDESKVRPMGRAAAG
VKGIDLKGDASMLGMEVSNGKGDLFVITEKGYGKRTPVSEYTEHNRGGQGIFTIQMTAKK
GDLASVKVVGPQHELMIMSQEGTVIRLKTAEISQLGRATQGVKIMNVSDGDRITSVARMV
AGKAKAKKKDDGQATLSLTIEDPSAEDESIDVGGEEFYDESILGDDEE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
gtggcagataacaaacgacccggcgatggcgggtttgacgacgagttggactccggcgtc
aacgaaggcgatctctttgaggacgacgaggtgcgcgagggtgcggtaggccccaacgac
gacgtcgagctcgacgatcccgaggatagctctgactctgacgacaatattgactatgat
ctcaccgtggaagaagacggcgatgagatgggggtggagctcgattccattggcgactcc
accaccggccttctggccgatgagggcggctcccgcctggaccttaccgacattcacggg
ggaaccctgaaacccatcgaccttcccagtgagatgcagaccagcttcatcgagtattcc
atgtcggtcatcgtggcccgcgccttgcctgatgtgcgcgacggcttgaagcctgtgcac
cgccgcatcctctacgccatgctggactccggcgtgcttcccaccaagcctcacaaaaag
agtgcctggacggtgggcgaggttatcggcaagtatcatccccatggagactcagcggtc
tacgacgctatggtgcgcctggcccaggacttctccatgtcggtgcctcttatcgacggc
catggcaactttggctctgtggatggtgaccccgccgctgccatgcgttacaccgagagt
cgcctggcaaagcctgccatggagcttctgcgcgacctcaacgacgacacagttgactgg
cagcccaactacgacgagtccatcatggagcccgccgtgctgcctagccgtttccccaac
ctgctggtcaacggctcgtcgggcatcgcggtaggcatggccaccaacatcacccctcac
aacctgggcgaggctatcgacgccacctgcatgatgatcgataatccagatgccacggtg
gacgagctcatgagcgtcatgcctggcccggactttcccaccggcgccgtcattatgggt
gccgagggcatccgcgattcctatgagaccggccgcggctccatctgcgtgcgtgccaag
gctcatgtggagaagatcaagggcaaccgccagcgcatcgtcatcaccgagatcccctat
caggtgaacaagggtctactccaagagaaaatcgccaagttggtgaacgacaaggtgatc
gagggtatctcagacatgcgcgacgagaccaaccgcaagggcatgcgcttggtcatcgac
ctcaaaaccaatgtggtgcccgaggtggtgctcaacaacctttataagcacacccagctc
caaaccacctttggcgccatcaatatcgccctggtagacggtgtccccaagaccctcacc
ctgcgcgagatgattggccactacatcgaccaccaggtagacgtggtgactcgtcgtacg
cagtaccgtctcaagaaggctcaaaaggagctgcacgtacgtgagggcctgcttatcgca
gtggacaacatcgatgaggtcgtccacatcatccgcagctcctactccgacgccgaggtg
cgcgagcgcttcaacgagcgctttggcctggacgaggttcagtccaacgccattcttgag
atgcgcttgaagcgcctcaccggcttggagcgcgagaagctggtggcagacatcgagcgt
ctcaaagaggagatcgcctatctggagagcctcttggcagatcgcaccaagcttctgggt
gtcatcaaggatgagatgcgcgagatcaaggataagtacgctcgccctcgccgcaccacc
atctccaatgcgcccatcacgctcaacgtggaggatctcatcgccgacgaggatatggtc
atcaccatcacccacgccggctatatcaagcgcacccccgtggccgattaccgctctcaa
aagcgtggcggcaaaggcgtgcagggagtctccctcaaagacaacgactttgtggaggag
ctctttgtagcctccacccacgactatattctcttctttaccaacctgggaaaggtctac
cgcctgaaggtgcacgagctgcccgttggcagccgcactgccaaaggaaccccgctggta
aacctgctggatctggctgatggcgagcacgccacctcggtctttaccaccagcgacttc
cctgagagcgagtatctcatgtttgccaccgccaagggcaatgtgaagaagacggcgctc
tctgcctatgaccgcacccgtcgcgacggcatgatcgccatcaagctcaatgagggtgat
cagctggtcaccgtgcgtcgcgtcaaggcgggtgagaaggttatcctcacctcctctgcc
ggcaagaccatcctcttcgacgagtccaaggtgcgccccatgggccgtgcggccgctggc
gtcaagggcatcgacctcaagggcgatgcctccatgctgggcatggaagtctccaatggc
aagggagacctctttgtcattaccgagaaaggttacggcaagcgcacgcctgtctctgag
tacaccgagcacaaccgcggcggtcagggcatcttcaccatccagatgaccgccaagaag
ggtgatctggcttctgtcaaggtggtgggcccgcagcacgagctcatgatcatgagtcag
gaaggcactgtcatccgccttaagaccgccgagatctcccagctaggccgtgccactcaa
ggcgtgaagatcatgaacgtctcagatggagacaggatcacctcggtggcccgtatggtt
gccggcaaagccaaggccaagaagaaggacgacggccaggcgaccctctcgctcactatc
gaggatccctcggcagaggacgagtccatcgacgtgggtggcgaggagttctacgacgag
tcgatccttggggatgacgaggaatag
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