Leptogranulimonas caecicola: ATTO_00130 Help Entry ATTO_00130        CDS       T08581                                  Symbol lhr Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism lcal  Leptogranulimonas caecicola Brite KEGG Orthology (KO) [BR:lcal00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:lcal03400]     ATTO_00130 (lhr) Enzymes [BR:lcal01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      ATTO_00130 (lhr)     5.6.2.6  RNA 3'-5' helicase      ATTO_00130 (lhr) DNA repair and recombination proteins [BR:lcal03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     ATTO_00130 (lhr) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WH_Lhr DEAD WH4_Lhr WH2_Lhr Helicase_C WH3_Lhr ResIII DEXQc_Suv3 PhoH DUF6406 Motif Other DBs NCBI-ProteinID:  BDC90141 UniProt:  A0AAU9CDN3 LinkDB All DBs Position complement(18236..23362) Genome browser AA seq 1708 aa AA seqDB search MRLSPLVRQWFARSFEAPTQVQEAAWNAILDRKNVLAVAPTGSGKTLAAFLCAIDRLMSD PPAAKGVVVLYVSPLKALAADVEKNLRRPLAELGELAASWGSDSDAVKTQGPATLPSVAI RTGDTPPRERARIKSKPPQILITTPESLYLMLTSQAASVLSRVETVIVDEIHSIAGSKRG AHLALSLERLDALLETPAQRVGLSATVQPVEEVARFLGGAHPVEVVGDAPAPAIDLAVRI PVANINAVPEFLGTGTPKLTRAPAPKDAWKTDRSLKAAMGAQAAEKPAPSNQEPFGASQP KAPQMSRESRVGSRSIWPSLEAELLSQVESHTSTLVFVNSRGLCERLTARLNERHAQEAG LRPAGAPVVEGAFRGSLGSPDSHTEPLPEGAEAIARAHHGSVSKERRLAIESELKAGSLP CVVATSSLELGIDMGSVDLVCQVAPPLSVASGLQRIGRANHRVGGRSQAILYPRTKLELI DCAVMAQAMLAGDIEATRLVKNPLDVLAQQTVAAVSQTPQGLRASQWFETVRRTANFSEL PREAFDRVMAMLAGAFATDDLESFAPRLVWDQAEDLLAPLPVSARMAISSAGTIPDRGLY PVFTHEAQGRQGRRRVGELDEEMVHESRVGDVITLGTTTWRITEISNDRVLVKPAKARAS RLPFWHGEGPGRPYEDGLRKGEFLAAASSALKGAEFDESFRDRLVQCGMEADAIGSLGQV LARQRAATGVIPSGQSLVIEMVEDEVGDTRLLLHSPFGRAVHAPWALAVADRIERLWGYD PEAMAADDGILLRLSPTASEVPGPETFIFEEEELRAAVQRRVASTSLFAARFRECAARAL LMRPSAFGKRAPLWAQRLQASQLLEQARQLEDFPMVLEALRECVQDVYDLDGLAHLMGQL RSKQVAITQVATTTPSPFAGNLLFGYVMEHLYDADKPQAERSAALLSIDPSLLADLLGSP DLSSLIDPAVLRQLEAQLQWLASGHKATSPAGLARMLRALGPLTLDEIARRCDPANVADA WLAQLSQEKQVFAGAVAGQPCWIAAIDGQALHQVLGLPVPSWAPAAPTTAPVAEKPAAQE LDVLVGLPLSPSLGIRTPEQPGRFLDALMARYAGCHGPFSTQAAAASLGLGAEPVADALE RLSAQDRLLRGDFGIDELGHERLWVAATVFKQLRKRSLAAAREAMEPVGMDTYLESLWHL QEIPAQDTRDQADPVDLLASCIALYEGVWLEAGAWEQVVFPARVPGYTPKLLDELLATGE VVWQGRRTLDAAKKPSYQVAFFPTDSPFAPLPLAAEAAADAHLAPNAPDAPDSSDPADSQ KLAGITPPQRADDLAATAADNPLWQALSKGGGWSFSALKEACATFAAGRGEAAPSSAEIQ AQLEDYLWGGLVLVDSFGPARQVSQPAKTTKAAPARRRSRSRYGRASASRAPRPASVPVD TALSGCWALTQAAEAADTERALALVQSALDRYGVLTPEVARAAAIPGGLSQIYPALRALE DTGGLWRGQFVDGLGPLQYATPDFVEALRASAAEKPAPADSKSPAADTPQTPPSTSHAAP ELRVLSATDPAQPLGALFPWPASAEKPTRRADAHCVFADGAPVLYASVHLKSIYVYMSAE DDEQVDTAAPSAAATTSSDDALVTHAIQALLAAEKAAAQRQGLSWANQKIEVELVDEQPV LKTHWAQVLANIGFVRTPSGMRFYPDPF NT seq 5127 nt NT seq  +upstreamnt  +downstreamnt atgcgcctctcgcccttggtgcgccaatggttcgcccggagcttcgaggcccctacgcag gtacaggaggcggcctggaacgccatcttggaccgcaagaacgtgctggcggtggcacct acaggatcgggcaagacgctggcggcgtttctatgtgccatcgatcggcttatgagtgac ccgcctgctgccaaaggcgtggtagtgctctatgtgtcgccactcaaggccctggcagcc gacgtggagaagaacctgcgccgtcctctggccgagctgggcgaactggcggcatcgtgg ggatcagacagcgacgccgttaaaacccagggacctgcaacgctgcccagcgtggccata cgcaccggcgacacgccgcctcgcgagcgggcgcgcatcaaaagcaagccgccccagatc cttatcaccactcccgagtcgctctatctcatgctcaccagccaggcggcctcggtgctg tcgcgggtggagacggtgatcgtcgacgagatccactccatcgccggctccaaacgaggc gcccacctggctctttcgttggagcgcctggacgcgctgttggagacgccggcgcagagg gtggggctttcggcgaccgtgcagccggtggaagaagtggcgcggtttttgggaggagcc catccggtggaagtggtgggcgatgctccagcgccggctatcgaccttgccgtgcgcatc ccagtggcaaacatcaatgcagtgccggagtttttgggcactggcacacctaagctcacg cgcgctcccgcacccaaagatgcctggaagaccgaccgtagcctcaaggccgccatgggc gcccaggctgccgagaaacccgcgccctccaaccaggaacccttcggcgcttcgcagccc aaggcgccccagatgtcccgggagtcccgagtgggctcgcgctccatctggccgtcgctg gaagccgagctcctctcccaagtcgaaagccacacctccacgctcgtctttgtgaactcc cgcgggctatgcgaacggcttaccgcccggctcaacgagcgccacgcccaagaagccggc ctcaggccggcaggcgccccggtagtcgagggggccttcaggggctctctcgggtccccc gattcccacacagaaccgctgcccgaaggggccgaggccatcgcgcgcgcccatcatggg tcggtgtccaaggagcgcaggctggccatcgagagcgagcttaaggcaggctcgctgcct tgcgtggtggccacatccagtctcgagctgggcatcgatatgggctcggtggatctggtg tgccaggtggctccgcccttgtcggtagcctcagggctccagcgcataggccgcgccaac catagggtgggaggccggtcgcaggccatcctctatccgcgcacaaaactcgagctcata gactgcgctgtaatggctcaggccatgctggcaggagatatcgaagccactcggctggta aagaaccctctggacgtgctggcacagcagaccgtggctgcggtgtcccaaacgcctcag ggccttcgggcctcgcagtggtttgagaccgtgcgacggacggccaacttctcagagctg ccccgcgaagccttcgaccgggtgatggctatgctggccggcgcctttgccaccgacgac ctggagagcttcgcccctcggctggtgtgggaccaggcagaagacctgctcgctcccctg ccggtctcggcgcgcatggccatctccagcgccggcaccatccccgaccggggcctctac ccggtgttcacccacgaggcccaggggcgacaagggcgccggcgcgtgggcgagctggac gaggagatggtccatgagagccgggtgggagacgtcatcactcttggaaccaccacctgg cgcatcaccgagatttccaacgaccgcgtgctggtgaagcctgcgaaggcgcgggcttct cggctgcccttttggcatggggaagggcccggcaggccctacgaggacggccttcgcaag ggggagtttctggcggcggcctcttctgcgctcaagggcgcggagttcgatgagagtttt agggatcgcctcgtccaatgcgggatggaggccgacgccatcgggagcctggggcaggtg ctggctcgccaacgggcggccaccggcgtgatccccagcgggcagtcgctggtcatagag atggtggaagacgaggtgggagacactcggctgctgctgcactccccctttggccgggcg gtgcacgctccctgggcgctggcggtggccgatcgcatcgagcgcctttggggctatgac ccggaagccatggccgcagacgacggcattctgttgcggctttcgcccactgcgagcgag gtgcctggaccggagaccttcatcttcgaagaggaggagctgcgcgcagccgtacagcga agagtggcttctacctcgctttttgccgcgcgtttccgcgaatgtgccgctcgcgccctc cttatgcgccccagcgcctttggcaagcgggcgccgctgtgggcccagcggctgcaagcc tcccagctcctggagcaggcgcggcagctggaggactttcccatggtgctggaggcgctg cgcgagtgcgtccaggacgtctacgacttagacggcctggcccacctcatgggccagctg cgctccaaacaggtggccatcacccaggtagccaccaccacgccgtcgcccttcgccggc aacctgctctttggctacgtcatggaacacctctacgacgccgacaagccccaggccgag cgctccgccgccttgctctccatagacccctccctgctggccgaccttctgggctcccct gacctttccagcctcatagaccccgccgtcctgcgccaactggaagcccagctccagtgg ctcgcctctggacataaggccacaagccccgccggcctcgcccgcatgctgcgggctttg ggaccgcttacgctcgatgagatcgcccggcgctgcgaccctgcaaatgtggcggacgcc tggcttgcccaactgtcccaggaaaagcaggtctttgcgggcgccgtcgccggccagccc tgttggatcgccgccatcgacggccaggccctccaccaggtgctgggcctcccagtaccc tcctgggcgccggccgctcctacgactgcccccgttgccgagaaacccgcagctcaggag cttgatgtcttagtggggctcccgctgtcgccctcacttggcatccggacccctgagcaa cccggccgctttctggatgccctaatggctcgctacgcaggctgtcacggcccctttagc acccaggcggccgcagcttctctgggcctgggcgcagagcctgtggccgacgccctagag cgcctgagtgcccaggaccgcctgttgcgcggcgactttggcatagacgagctgggtcac gagcgcctgtgggtggctgctacagtattcaaacagttgcgcaaacgctcgctggccgcc gcccgggaggccatggagcccgtgggtatggacacctatctggaaagcctctggcatctc caggagatcccggcccaagacacccgcgatcaggcagaccctgtggatctgctggcttcc tgcatcgccctctacgagggggtgtggcttgaggccggcgcctgggagcaggtggtcttc cctgcccgcgtgcccggctatacccccaagctactggacgagctgctggctaccggcgag gtggtgtggcaggggcgccgcacgctggacgctgccaaaaagcccagctaccaggtggcg ttcttccccaccgactcccccttcgccccgctgccgctggccgccgaggctgccgcagac gcgcatctcgcgcccaacgcccctgacgcgccggattccagcgatcccgccgattcccaa aaactcgccggcatcaccccgccccagcgcgccgacgatcttgccgccactgccgccgac aaccccctttggcaagcgctgtccaagggaggcggctggtccttctcggcattgaaggag gcctgcgccacctttgcggcagggcgcggcgaagcggccccaagctcggcagagatccaa gcccagctggaggactacctgtggggcggtctagtgctggtggactcctttgggccggcc cgccaggtttcccagcccgccaaaacgaccaaagccgctcccgcccgccgccgatcccgc tcccgctatggacgcgcctcggcgtcgcgggcgccccgacctgcctcggttcccgtggac acggcgctttccggctgctgggccctcacccaagccgccgaggccgccgacactgagcgc gccctcgctctggtgcaatccgcgttggaccgctacggggtccttacccccgaggtggcc cgcgccgccgccatccccggcggactcagccagatctacccggcccttcgcgcgctggaa gacaccgggggtctctggcgcggccagtttgtggacggcctgggcccgctgcagtacgcc acccccgactttgtggaggcccttcgcgcttccgctgccgagaaacccgcccccgctgac tccaagtcccccgctgccgacaccccgcagacgccaccctccacttcccacgctgcccct gagttgcgggtcttgtccgccaccgatcccgctcagcccctgggtgccctcttcccttgg cctgcaagtgccgagaagcccacccgccgggctgacgcccactgcgtcttcgccgacggc gccccggtgctctatgcgagcgtgcatctcaaatctatatatgtctatatgtcagctgaa gacgatgagcaggtggacaccgctgcaccatcggccgccgccacgaccagcagcgatgat gccctggtgacccacgccatccaggcgcttttggctgccgagaaagctgccgcccagcgc caaggcctctcttgggccaaccaaaagatcgaagtggaactggtggatgagcagccggtt ctcaaaactcactgggcccaggtgctggcgaacatcggctttgtgcgcaccccctccggg atgcgcttctatcccgacccgttctag

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