KEGG   Leptogranulimonas caecicola: ATTO_03500
Entry
ATTO_03500        CDS       T08581                                 
Symbol
hsdR
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
lcal  Leptogranulimonas caecicola
Brite
KEGG Orthology (KO) [BR:lcal00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lcal02048]
    ATTO_03500 (hsdR)
Enzymes [BR:lcal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     ATTO_03500 (hsdR)
Prokaryotic defense system [BR:lcal02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   ATTO_03500 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD DUF4145 Helicase_C HSDR_N HSDR_N_2 DUF2726 WWE_3 AAA_30 AAA_19 SLFN-g3_helicase vWA-TerF-like TOR1L1_C Csm1_N REST_helical
Other DBs
NCBI-ProteinID: BDC90478
UniProt: A0AAU9CV89
LinkDB
Position
396273..399668
AA seq 1131 aa
MLVVNFDFLKRDDGYYSLFADACIEAEKVFPASAAMCAVGCRKALELAVKWVYAIDESIS
MPYRDNLASLLHERSFMEAVDERVWRKLIGINKLGNLSVHTDRSVAPQDAVLALRSLFEF
TDWIDYCYGPDYVERTFDERKIPAHGIQLTASQIKAIKKRESLLNERDEEIKYLEAELAK
LSAQVSQAKEQNKRQRDFNPEDISEFETRKRYIDWDLALAGWKLGENALEEREVHGMPAE
LGNNAGTGYVDYLLVGKDGRPLAVVEAKRTSHSEQKGLKQARLYAACLEKEFGYKPPIFL
TNGFTTLFADDEVGAPRPVSGVFSQDDLQRLLNRRTSSIRPSTISVNKTIAGGGRRYYQD
EAIQRVCANIEAAHRKSLLVMATGTGKTRVSAALVDVLMRAGLVKNVLFLADRVALVRQA
KHGYQDYLPNVSLCNLCSNKDDRNARVVFSTYPTIMNAIDNERNEDGDRMFTPAHFDLII
VDEAHRSIFKKYRAIFEYFDSLVVGLTATPANEVDRNTYDFFDVERGVPTYVYEYKTATE
VDHVLVPYLGIETHTGFLDEGITYDDLSPEEREQFEDDFEETGQEVPDKVDAAEINRWVF
NEATVDSVLVTLMEKGIHTQGGQELGKSVIFAQSQKHARYIVERFGKLYPGLPGDYIQAV
VHSDDYSHAVIDDFELKTRPVIAVSVDMMDTGVDVPEIVNLVFFKKVRSKIKFWQMIGRG
TRLCEGLEVVDPIDGRTHENKERFFIFDWCRNFEFFRENSKPVEGKLAVTVAERVFSRQA
ELAAALQESAFAGEEYQSWRARLVETMRGQVVALNDEIFTVRAHRREVEKYRRVESYMLL
SSVALSELKNPISMLVVNNEPDLYALRFDSLMYGYMVAKCREQNVDSYKTRVVWMARHLS
SLATVPQVKEQLPLIERVADSQMLDEAGLLELEDVRMKLRSLIKFIIGGSQRRDVVTHLD
DPVSRITYGVTADIGDDFEDYKLKVERYLKDYGNSLVINKLRTNKPMTEYEFGLLERIFT
HDLGNAEDYTRAYGDTPFGLLVRKIAHLDRDAAMEAFASFLNDQSLNEQQISFIKRVVDY
VVENGYMEPKTLNKPPFDRPRSFMQIFSAQQQMDLVGVIKSIKENAVEPVA
NT seq 3396 nt   +upstreamnt  +downstreamnt
gtgctggtcgtgaactttgatttcctcaagcgggacgacggctactacagcttatttgcc
gatgcctgcatcgaggcagagaaagtctttcccgcatcggccgccatgtgtgctgtaggt
tgccgaaaggcacttgagctcgctgtgaagtgggtctatgccatcgatgagtctatcagt
atgccttaccgtgacaatttggcttcactcctccatgagcgttcgtttatggaagcagtt
gacgagcgcgtgtggcgcaagcttattggcattaataaactagggaatctgtcggtccat
actgatcgctccgtagcaccacaggatgctgttcttgcactgcgcagtcttttcgagttc
accgactggattgactactgctatggtcctgattatgtcgagcgcacctttgatgagcga
aagattcctgctcatggcatacaacttaccgcgtctcagataaaggccatcaagaaacgt
gagtccctccttaacgagagggatgaggaaatcaagtaccttgaggctgaattagctaag
ctctctgcacaagtaagccaagcaaaagaacaaaacaagcgccaacgtgacttcaatcct
gaagatatttccgagttcgagacgcgcaagcgctacatcgattgggatctggcgcttgcc
ggctggaagctaggtgaaaatgcgcttgaagagcgcgaagtacatggaatgcccgcggag
ctaggaaacaatgctggcactggatatgtggactacctgcttgtcggaaaagacggtcgt
ccactagccgtggtggaggcgaagcgtacttcgcactctgagcagaagggcctgaaacaa
gcccgactatacgctgcctgcctggagaaggaattcggctacaagccaccaatctttctc
accaacggttttaccacattgttcgccgacgacgaagtcggcgcaccccgtcctgtaagc
ggtgtcttctcgcaagacgatttgcagaggctcctcaatcggcgcacatcgtccatcagg
ccgtcgacgatttcggtgaacaagaccatagccggcggaggcaggcgctactaccaggat
gaggctattcagcgcgtctgcgccaacatagaggcagctcatcgtaagagcttactggtt
atggctacaggcacaggtaagactcgcgtctcggcagcccttgtcgacgtgctcatgcgt
gcgggtctggtgaagaatgtgctattcttggccgatcgcgtggctcttgtgcggcaggcg
aagcatggttaccaagactacttgcccaacgtgtcactgtgcaacctgtgctctaacaag
gatgaccgcaatgcccgtgttgtcttctccacatatcccaccattatgaatgccattgac
aacgagcgaaatgaggacggtgaccgcatgttcacgccggctcacttcgacctcattatc
gttgacgaagcacatcgctctatttttaagaagtatcgcgccattttcgaatacttcgat
tcgctcgtggtgggccttaccgccacgcctgctaatgaggtggatcgcaatacgtacgac
ttcttcgatgtggagcgtggtgtgcctacttatgtctacgagtataagacggcaaccgag
gtggatcatgtattagtgccgtacttgggaatagagacgcacacgggctttctcgacgaa
ggcataacctatgatgatctttctcctgaagagcgtgaacaatttgaggacgacttcgag
gaaaccggccaggaagtacccgacaaggtggatgccgctgagattaaccgctgggtgttc
aatgaagcgacagtcgacagcgtactggtgacattgatggagaaaggtattcacacacaa
ggtggccaggagctgggcaagagtgttatttttgcgcaaagccagaagcacgcacgctac
attgtagagcggtttggcaagctctaccccggtcttcctggggactacattcaggctgtg
gtgcattccgacgactattctcacgctgttatagacgacttcgaactcaagacacgtccc
gtcattgctgtttcggtggacatgatggataccggcgttgacgtacccgagatcgtaaac
ttagttttctttaaaaaggtgcgctccaaaatcaagttctggcagatgatcggtcgcggc
acgcgtttgtgtgaggggcttgaagttgtggacccaatcgatggaaggacgcatgagaac
aaggagcggttcttcatcttcgactggtgtcgcaatttcgagttcttccgtgagaattcc
aagcctgtagaaggtaagcttgcggtcacggtggccgagcgggtatttagccgtcaggcg
gagcttgcggctgcattgcaggagagtgcattcgcgggcgaggaatatcaatcatggagg
gcgcgactggtggaaaccatgcgtggccaggtagtcgcgctcaacgatgaaattttcacc
gtgcgtgctcacagacgcgaggtagagaaataccggcgcgtggaatcctacatgctgctc
tcctcagtggcgctttccgagctgaagaatccaatttccatgcttgttgttaacaacgaa
cccgatctctatgcattgcgttttgacagccttatgtacggctatatggtggccaagtgc
cgggaacaaaatgttgattcttataagacgcgtgtcgtctggatggcgagacacttgtct
tctttggcgacagttccgcaagtcaaagagcagctcccccttatcgagcgcgtggcggac
agtcagatgcttgacgaggctggtctgcttgaattggaagacgtgcgcatgaaactgcgc
tcgctcatcaagttcattatcggtggctcgcaacgccgtgacgtggtgacgcacttggat
gatccagttagccggataacctacggtgtgactgcagacattggcgacgatttcgaggac
tacaagctcaaggtggaacggtaccttaaggattatggtaatagccttgttatcaacaaa
ctacgtactaataagcccatgacggagtacgagttcggcttgttggaacgcatattcacc
cacgacctgggaaacgctgaggactacactcgcgcatacggcgacacaccgttcggttta
ctggtgcgtaagatagcgcatcttgaccgagatgctgccatggaggcgtttgcgagcttt
ttgaatgaccagagtctgaacgagcagcagatatcgttcatcaagcgtgtggtggactac
gtggtggagaatggttacatggagcctaagacgctcaataaaccgccgtttgaccgacca
aggtcattcatgcagatattcagcgcacaacagcagatggatttggtaggagtaatcaaa
tctattaaggaaaacgccgttgagcccgtggcatag

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