KEGG   Leptogranulimonas caecicola: ATTO_05050
Entry
ATTO_05050        CDS       T08581                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
lcal  Leptogranulimonas caecicola
Pathway
lcal03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lcal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ATTO_05050 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lcal03021]
    ATTO_05050 (rpoA)
   03400 DNA repair and recombination proteins [BR:lcal03400]
    ATTO_05050 (rpoA)
Enzymes [BR:lcal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ATTO_05050 (rpoA)
Transcription machinery [BR:lcal03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ATTO_05050 (rpoA)
DNA repair and recombination proteins [BR:lcal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ATTO_05050 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L AMIN-like RNA_pol_L_2 SAM_EPH
Other DBs
NCBI-ProteinID: BDC90633
UniProt: A0AAU9CJL6
LinkDB
Position
560149..561090
AA seq 313 aa
MSEFIRPQVSVEEVKTNVARVTVEPLEGGFGDTLGNSIRRVLLSSLEGAAVRAIRIDGVQ
HEFSTVEGVYEDVTDIVLNVKKLVFQRTGSAEEAEAEVNIEGPATVSGADFLVPAGFELV
NPELVICHLGEGAHLKMTLYLGCGRGYVSGENNEGDNDAIGIIHVDSLYSLVRRCAKTVE
PCRVGQHTDFDRLVLEVETNGAKDPREAVVEAANIINQHMSAFMTLNEEGDHEEEVSIFV
SNEEDDNSELDKPIEGLDLSVRSYNCLKRAGIHTVRQLVDYSENDLLNIRNFGVKSIEEV
KDKLESMGLGLKA
NT seq 942 nt   +upstreamnt  +downstreamnt
atgtccgaattcatccgaccgcaggtgtcggtagaagaggtcaagaccaacgtcgcccgc
gtgaccgtcgagcccctggaaggcggctttggcgacaccctcggcaactccattcgccgc
gtgctcttgtctagcctggagggcgcagctgttcgtgctattcgtatcgacggcgtgcag
catgagttctctacggtagagggcgtctatgaggacgtcaccgatatcgtcctcaatgtg
aagaaactcgtcttccagcgcaccggctctgccgaggaagctgaggctgaggtcaacatc
gagggtcccgccactgtctctggtgcggatttcttggtgcctgcaggttttgagctggtc
aatcccgagctcgtcatctgccacctgggtgagggcgctcatctcaagatgaccctctat
ctgggctgtggccgtggctatgtctctggtgagaacaacgagggcgacaacgatgccatc
ggcatcatccacgttgattccctctactctcttgtgcgtcgctgtgccaagaccgtcgag
ccttgtcgcgtgggtcagcatactgacttcgatcgcctggtgctcgaggtggagaccaat
ggcgccaaggatcctcgtgaggctgtggtcgaggccgccaacatcatcaatcagcacatg
agcgcattcatgacgctgaacgaggaaggcgaccacgaggaagaagtgtccatcttcgtg
agcaacgaggaggacgacaactctgagctcgacaagcctatcgagggcctcgacctcagc
gtgcgttcctacaattgcctcaagcgcgccggtatccacaccgtgcgccagctggtggac
tactcggagaatgacctcctcaacatccgcaacttcggcgtgaagtccatcgaggaagtc
aaggataagctcgagtctatgggcctgggcctcaaggcttaa

DBGET integrated database retrieval system