Leptogranulimonas caecicola: ATTO_05550
Help
Entry
ATTO_05550 CDS
T08581
Name
(GenBank) 2-hydroxyglutaryl-CoA dehydratase
Organism
lcal
Leptogranulimonas caecicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2229
BcrAD_BadFG
DEDD_Tnp_IS110
FGGY_N
HGD-D
RRXRR
Motif
Other DBs
NCBI-ProteinID:
BDC90683
LinkDB
All DBs
Position
616097..620773
Genome browser
AA seq
1558 aa
AA seq
DB search
MTNIQENPYGLEARGAELVPCALSAAAEKPVPSLEDLRLGIDVGSTTVKVAVIDSQGQLV
YANYQRHHTDIRACAKDLFLKAQAWVGDTPMRVSITGSGGLLLSQWLDLEFVQEVIASKR
AVETLIPQTDCAIELGGEDAKIIYFDNGIEQRMNGTCAGGTGAFIDQMASLLHTDASGLN
TLAEKATHIYPIASRCGVFAKSDVQPLLNEGAAPADIAASIFQSVANQTVSGLACGHPIR
GHVAFLGGPLQYLPQLRERFYETLELPEDCRIVPENAHLFVATGAALAGESSKRSTFSQV
IDALDSLGDTQGSEVERLDPLFATQKDLDEFHERHSREVVPTADLASYQGRVFIGIDAGS
TTMKAAMVGEEGQLLRTWYGNNNGDVLGTATIIMDDFYDALPEGCVIGHVTTTGYGEALL
IEALKADSGEIETVAHLRGAKAFVPQVEFILDIGGQDMKCLRVKDGVIDSIMLNEACSSG
CGSFIESFADSMGMDVRDFAAAAVGADKPVDLGSRCTVFMNSRVKQAQKEGATVGDIAAG
LSYSVIKNALFKVIKLRDAEEIGASVVVQGGTFMSDATLRAFELLTGREAIRPDIAGCMG
AYGAALLARDRAGKDGTSSLLTRAEIDNLRVKRIKAHCGRCSNNCLLTINDFGGGRRFIT
GNRCEKGAGSHKQKSQAPNLFEVKNRLLFDRPSLDPERAPRGTVGIPRALNMYENYPFWH
AFFTELGFSVIPSDNSTKATYEAGIESMPSESVCYPAKLSHGHVVNLLQKDVDFIWMPCV
RWERQEDPTAGNHYNCPIVMSYPQALELNMDELADPSVEYLAPFVPYDDKNELKRRLYEV
VSVQREADAASGRGRVRGEHITRAQIDAAVNAAWQADLDFKRAMEVAGDEALAWIEANDA
HGIVLAGRPYHNDPEINHAIPELVASFGFAVLTEDSVAHHMRPERPIRVVDQWMFHSRLY
RAARFVASRNDLDLIQLNSFGCGLDALTTDQVQEILEAAGKIYTVLKIDEVSNLGAARIR
IRSLMAALKEQRAELEAQYPGAEHLPQERTAASAAFAKPRYTQEMFEEGYTILVPQMAPI
HFALVEPIIKAAGYNMVLLPSVDRGAVDAGLKYVNNDICYPSILVTGQIMEAIESGKYDL
DKTAVLITQTGGGCRATNYIALIRKALKDSGNGHIPVISLAVAGGLDEDNPGFNLLKPAV
LVKACYALLFGDLIMQLLYRTRPYEDVPGSANELFEQIMAEAEAAMPTMGPRDFYRLCQR
TIDAFEILPLVNDRSKPRVGVVGEILVKFHPTANNEVVKVIESEGCEAAVPGLVDFFLFG
LTSPINMRGELGSSFKRRATHMAGIKLIDSLRAPINRMLEETTRFEPYAQIFELAEKASQ
ILSLCNTMGEGWLLTAEMVDLIETGCPNIVCCSPFACLPNHVVGKSVIKRLRQMHPESNI
VAVDYDPGASEVNQLNRIKLMISVAKENFRAAQAAGRGAGSFKLVNPEDPTLGYEPVDER
ELRRGATSLCHAHMNAAEPIRLSDAQLRMIAAAEAEAAQRARAKAEDAEVERSEVARS
NT seq
4677 nt
NT seq
+upstream
nt +downstream
nt
gtgactaacatccaagaaaacccctacggtcttgaggctcgcggcgccgagctggtgccc
tgcgcgctctctgctgctgccgagaagcccgtgccttcccttgaagacctccgcctgggc
atcgacgtgggttccaccacggtgaaggtggcggtcatcgactctcagggccagctagtc
tatgccaactaccagcgccaccacaccgacatccgcgcctgcgccaaggacctcttcttg
aaggctcaggcctgggtgggcgatacccctatgcgcgtgtcaatcaccggctccggtggc
cttctgctctctcaatggctggacctggagtttgttcaggaggtcatcgcctccaagcgt
gccgtggagacccttatcccccaaaccgactgcgccatcgagctgggtggcgaggacgcc
aagatcatctacttcgacaacggcatcgagcagcgcatgaacggcacctgtgcaggcggc
accggcgccttcatcgatcagatggcttcccttttgcataccgacgcctcgggtctcaac
accctggccgagaaggccacccacatctaccccatcgcctctcgctgcggcgtctttgcc
aaatccgacgtgcagcccctgctcaacgagggcgctgctccggcagacattgccgcctcc
atcttccagtcagtggccaaccagacggtctccggtctagcatgtggccatcccatccgc
ggtcatgtggcctttttgggcggccctctccagtacctgcctcagctgcgcgagcgcttc
tacgagacgctggagctgcctgaggactgccgcattgtgcccgagaacgcccatctcttt
gtcgccacgggcgccgcgctggcaggcgagtcgtctaagcgctccaccttcagccaggtg
atcgatgcgctggactcgctgggcgacacccagggctctgaggtagagcgtctcgacccg
ctctttgccacccagaaagacctggacgagtttcacgagcgccacagccgcgaggtagtg
cccaccgcagatcttgccagctaccaagggcgcgtgtttatcggcatcgatgctggctcc
accaccatgaaggccgccatggtgggcgaggagggccagctgctccgcacttggtacggc
aacaacaacggagacgtgctgggcaccgccaccatcatcatggacgacttctatgatgcg
ctgcctgagggctgcgtcatagggcacgtgaccaccaccggctatggcgaggcgctgctc
atcgaagcgcttaaggcagactctggcgagatcgagaccgtagctcacctgcggggcgcc
aaggccttcgtgccccaggtggagttcatcttggacatcggcggccaggacatgaaatgt
ctgcgagtaaaagacggcgtcatcgactccatcatgctcaacgaggcctgctcttctggc
tgcggctccttcatcgagagcttcgccgattccatgggcatggacgtgcgcgactttgcc
gccgccgcggtgggcgccgacaagccggtggatttgggcagccgctgcacggtgttcatg
aacagccgcgtgaagcaggcccagaaagagggcgctaccgtaggcgacatcgcggcaggc
ctgtcctactcggtcatcaagaacgcgctcttcaaggtcatcaagctccgcgacgcagaa
gagatcggcgcctcagtggtggttcagggcggcaccttcatgagcgacgcaacgctgcgc
gccttcgagctgctcaccggccgcgaggccatccgccccgacatcgccggttgcatgggt
gcctacggtgccgccctgctagcccgcgatcgtgccggcaaggacggcacctcgagcctg
ctcacccgcgccgagatcgacaaccttagggtcaagcgcatcaaggcccactgcggccgc
tgctccaacaactgcctgctcaccatcaacgactttggcggaggccgccgcttcatcacc
ggcaaccgctgcgagaagggtgcaggctcccacaagcaaaagtcgcaagcccctaacctc
ttcgaggtaaagaaccgcctgctcttcgaccgtccttccttggatcccgagcgcgccccc
cgcggcaccgtgggcatcccccgcgccctgaacatgtacgagaactatcccttctggcat
gccttctttacggagttgggcttctcggtcattccttccgataattccaccaaggccacc
tacgaggcgggcatcgagtccatgccctccgagagtgtgtgctatcctgccaagctctcc
cacggccatgtggtgaacctgctccaaaaagacgtggacttcatctggatgccctgcgtg
cgctgggagcgccaggaggatcccaccgcaggcaaccactacaactgccccatcgtcatg
agctatccccaggcgttggagctcaacatggacgagctggcagacccctcggtggagtat
ctggcgccttttgtgccctatgacgacaagaacgagctcaagcgccgcctctacgaggta
gtgagcgtgcagcgcgaggccgacgcagcctcgggccgcggccgggtgcgcggcgagcat
atcacccgcgcccagatcgacgccgcagtgaacgccgcctggcaggcagacctggacttc
aagcgcgccatggaggtggcgggcgacgaggctctggcttggatcgaggccaacgacgcc
cacggcatcgtgctggcagggcgcccttaccacaacgaccccgagatcaaccacgccatc
cccgagctggtggcctcctttggcttcgcggtgctcaccgaggactcggtggcccatcac
atgcgtcccgagcgccccatccgcgtggtggaccagtggatgttccacagccgcctctac
cgtgccgcccggtttgtggccagccgcaacgacctggacctcatccagctcaactccttt
ggctgcggcctagacgccctcaccaccgaccaagtgcaggagatcctggaggctgccggc
aagatctataccgtcttgaagatcgacgaggtctccaacctgggcgcggcccgcatccgc
atccgctccctcatggcggccttgaaagagcagcgtgccgagctggaagcccaatacccc
ggcgccgagcacctgccgcaggagcgcactgctgccagcgcggccttcgccaagccccgc
tacacccaggagatgttcgaggagggctacaccatcctggtgccccagatggctcccatc
cacttcgccctggtggagcccatcatcaaggctgctggttataacatggtgcttctgccc
tcggtggaccgcggcgccgtggacgctggcctcaagtatgtgaacaacgacatctgctac
ccctccatcctggtgaccggccagatcatggaagccatcgagagcggcaagtacgacctt
gacaagaccgccgtcctcatcacccagaccggcggcggctgccgcgccaccaactatatc
gccctcatccgcaaggcgctcaaagactccggcaacggccacattcccgtgatctctctg
gcagtggccggcggcctggacgaggacaaccccggcttcaacctgctcaagccggccgtc
ttggtgaaggcctgctatgcgctgctctttggcgacctcatcatgcagctgctctatcgc
acccgtccctacgaggatgtgcccggcagcgccaacgagctcttcgagcagatcatggcc
gaggccgaggccgccatgcccaccatgggccctcgcgacttctaccgcctgtgccagcgc
accatcgacgccttcgagatcctgccgctggtcaacgaccgctccaagccccgcgtgggc
gtggtgggcgagatcctggtgaagttccatcccaccgccaacaacgaggtggtcaaggtc
atcgagtccgagggctgcgaagcggcggtgcccggcctggtggacttcttcctctttggg
ctcaccagccccatcaacatgaggggagagctgggcagctctttcaagcgccgcgccacc
cacatggcgggtatcaagctcatcgactctttgcgtgcccccatcaaccgcatgctcgag
gagaccacccgcttcgagccctacgcccagatcttcgagctggccgagaaggccagccag
atcctgtccctgtgcaacaccatgggcgagggctggctgctcacggccgagatggtggac
ctcatcgagaccggctgccccaacatcgtgtgctgcagtcccttcgcgtgcctgcccaac
cacgtggtgggcaagagcgtcatcaagcgcctgcgccagatgcatccggagtcgaacatt
gtggcggtggactacgaccccggtgcctccgaggtcaaccagctcaaccgcatcaagctc
atgatctcggtggccaaggagaacttccgcgcagcccaggctgccggcaggggcgccggc
tccttcaagctggtgaaccccgaagatcccaccctgggctatgagccggtagacgagcgt
gagctgcgccgaggtgccacttctctttgccatgcccacatgaacgctgccgaacctatt
cgcctctccgacgcccagctgcgcatgatcgcggcggccgaggccgaggccgcgcagcgg
gcacgggccaaggcggaagacgcagaggttgagcgctcagaggttgcacgcagctag
DBGET
integrated database retrieval system
