Leptogranulimonas caecicola: ATTO_07460
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Entry
ATTO_07460 CDS
T08581
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lcal
Leptogranulimonas caecicola
Pathway
lcal02024
Quorum sensing
lcal03060
Protein export
lcal03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ATTO_07460 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ATTO_07460 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ATTO_07460 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lcal02044
]
ATTO_07460 (ffh)
Enzymes [BR:
lcal01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ATTO_07460 (ffh)
Secretion system [BR:
lcal02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ATTO_07460 (ffh)
Eukaryotic Sec-SRP protein
ATTO_07460 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
CbiA
AAA_33
Zeta_toxin
AAA_16
nSTAND3
NACHT
MMR_HSR1
APS_kinase
AAA_17
ResIII
AAA_5
Pox_A3L
AAA_18
AAA_28
NPHP3_N
AAA_14
KTI12
6PF2K
TsaE
Motif
Other DBs
NCBI-ProteinID:
BDC90874
UniProt:
A0AAU9D731
LinkDB
All DBs
Position
856138..857544
Genome browser
AA seq
468 aa
AA seq
DB search
MFNSLSDRLQDTFDKLRGKGRLTEDDINVAMREIRLALLEADVNFKVVKRFVASCKERCM
TSEVLDSLTPSQNVVRIVLEELTELLGSTESKLVLAQNRIPNVIMLVGLQGSGKTTAAAK
LAYLLKKQKRSPLLAACDVYRPAAADQLATLGGEIGVPVYRGDGKDPVAIAKGAVQEAVD
TLRDVVIVDTAGRLQIDEAMMQEAVAIKNAVRPDQVLMVVDAMTGQDIVNVVTEFAERTD
FDGVIMSKLDGDARGGGALSVREVTGKPIKFVSMGEKPSSLEVFHPDRMAKRILGMGDLY
GIIDAAQQAADEEQMARAEKMLREGFTMDDMLHQLQSIRKMGGLSKIISMLPGGERMLGQ
TPDAADESQLVRIEAMIRSMTPEERLRPKIINGMRRSRIAKGSGRTVQEVNALIKQWGEM
NRMMGKIRAMANGGDMSPKAMKRMMNQMAAGATGAGKKRGGTNPYNRR
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacagtctttccgatcgcctccaggacacctttgacaagctgcgtggcaaaggc
cgccttaccgaggatgacatcaacgtcgccatgcgcgagattcgcttggcgctccttgag
gccgacgtcaatttcaaagtggtgaagcgctttgtggcctcctgcaaggagcgctgcatg
accagcgaggtgctggactccctcacgccatctcaaaacgtcgtgagaatcgtgctggag
gagttgactgagcttctcggcagcaccgagtccaagctggtgctcgcacagaatcgcatt
cccaacgtcattatgctggtgggccttcagggctctggtaaaacgactgctgcagccaaa
ctcgcttacttgttgaagaagcagaagcgcagcccccttttggctgcctgcgacgtctat
cgtcctgcagccgccgatcagctggcaaccctgggcggcgagattggcgtacctgtctat
cgaggcgacggcaaagatcctgtggctatcgccaagggcgctgtgcaagaagccgtggat
accttgcgcgacgtggtcattgtggatactgctggccgcttgcagatcgacgaagccatg
atgcaagaggcggtggccatcaaaaatgcggttcgtcccgaccaggtactcatggtggtc
gatgccatgaccggccaggatatcgtgaatgtggtcaccgagtttgccgagcgcaccgat
tttgacggcgtcatcatgtccaagctcgacggcgatgctcgcggcggcggcgcgctctcg
gtgcgcgaagtcaccggcaagcccatcaagtttgtctccatgggagagaagcccagctcg
ctggaggtcttccatcccgatcgcatggccaagcgcatcctggggatgggcgacctctac
ggcatcatcgacgctgctcaacaggctgccgacgaggagcagatggcccgcgccgaaaag
atgcttcgcgaaggcttcaccatggatgatatgcttcaccagctgcaatccattcgcaaa
atgggtggattgtccaagatcatctctatgctgcccggaggcgagcgcatgttagggcaa
actccagatgcagccgacgagagccagttggtacgcatcgaggccatgattcgttccatg
acacccgaagagcgtctgcgtcccaaaatcatcaatggcatgcgtcgctcgcgcattgcc
aaaggatctggtcgcacggtgcaggaggtgaacgccctcatcaagcaatggggtgagatg
aaccgtatgatgggcaagattcgcgccatggctaacggaggcgacatgagtcccaaggcc
atgaagcgcatgatgaaccagatggccgctggcgccacaggagcagggaagaagcgcgga
ggcaccaatccctacaaccgccgttag
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