Leptogranulimonas caecicola: ATTO_07670
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Entry
ATTO_07670 CDS
T08581
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lcal
Leptogranulimonas caecicola
Brite
KEGG Orthology (KO) [BR:
lcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcal03016
]
ATTO_07670 (truB)
Enzymes [BR:
lcal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ATTO_07670 (truB)
Transfer RNA biogenesis [BR:
lcal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ATTO_07670 (truB)
Prokaryotic type
ATTO_07670 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF3515
Motif
Other DBs
NCBI-ProteinID:
BDC90895
UniProt:
A0AAU9CDM6
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All DBs
Position
887774..888724
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AA seq
316 aa
AA seq
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MKRRPSAVNALFAVDKPCGMTSHDVVGVARRALSERAVGHAGTLDPDASGVLVLGVGQAT
KLLGLLTLETKAYEASIRFGCRTTTDDAEGAPVAIAPVPSALADHEAASTLVGSLPGDVD
QVPPAYSAISVAGKRAYDLARQGEEVMLAPRKVSILRAELLSVASYDAIVTWRVFLEVSK
GCYIRSIARDLGEDIGCHAHICGLRRVASGSINQDLCLSLEELQAGGVQAVRDAMIDPVA
ALGLPVRELSAQEQVAAAQGKRLARGPEPLSQGDHVCLVRQGQLYGVWEVRGSQLACATN
LVRGVEGVRYGSARKS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgccgtccaagcgctgtaaacgctctgtttgctgtggacaagccttgtgggatg
accagccacgacgtggtgggcgtggcccgcagggcactaagcgagcgtgcggtgggccat
gcgggaacgctggatcctgatgcatcgggagtattggtgttgggcgtaggtcaagccacc
aagctgttagggctccttactctggagaccaaggcctacgaggcttccatccgctttggg
tgccgtaccaccaccgacgacgctgaaggcgcgcccgtggccatagctccagtgccctct
gctctggcagaccatgaggcagcctccaccttggtcggatctcttcctggcgacgtcgat
caagtgcctccagcctatagcgcaatttctgtggcaggaaagcgagcctatgatctagct
cgtcagggcgaagaagtaatgcttgcccctaggaaagtctccatcttaagggcggagctt
ttatcggttgcctcctacgacgccatcgtcacctggcgcgtatttttggaggtatccaag
ggctgctatattcgctccattgcacgagatctgggagaagacattggctgccatgctcac
atatgcgggcttagaagggtggcttcgggatctatcaaccaggatctatgcttaagtttg
gaggagctccaagccggcggcgtccaggcagtgcgcgatgccatgatcgatccagtggcg
gcattggggcttccggtgcgcgagctttccgcccaagagcaggtggcggctgctcagggt
aagcgtttggcgcgaggtcctgagccgcttagccaaggagatcacgtatgtttagtgcgc
caagggcagctttatggcgtgtgggaggtacgcggaagccaactggcctgtgccactaat
ttggtgcgaggagtcgagggggtgcggtatggaagcgctcggaagtcctag
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