Leptogranulimonas caecicola: ATTO_08860
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Entry
ATTO_08860 CDS
T08581
Symbol
oppD
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
lcal
Leptogranulimonas caecicola
Pathway
lcal02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lcal00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ATTO_08860 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcal02000
]
ATTO_08860 (oppD)
Transporters [BR:
lcal02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
ATTO_08860 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_25
AAA_22
AAA
NACHT
AAA_7
ABC_ATPase
Mg_chelatase
ATP-synt_ab
DUF87
Motif
Other DBs
NCBI-ProteinID:
BDC91014
UniProt:
A0AAU9D3R3
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All DBs
Position
complement(1019373..1020395)
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AA seq
340 aa
AA seq
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MAESTLRGAQGENLLEVNDLCVTLFTDAGELPCIQNLSFVMRRGETLAVVGESGCGKSMT
ALSIMNLIPKPPAKIVGGAIRFEGTDLVQLSEEQMRSYRGNAISMIFQEPMTSLNPVMLC
GKQIAEGLLVHNKEMSKQEADERALEMIKFVGIPAPEKVAHSYPFELSGGMRQRIMIAMA
LACSPAMLICDEPTTALDVTIQAQVLQLIDKMREETNTAVMLITHDMGVVSEMADWVLVM
YAGRQVEYTRSPVLFKHPAHPYTQGLIDSIPSMESSSGELYAIPGNVPMLSDLPSGCLFH
PRCPHAKGICTKQCPRFTPVEGDENHQVACWMYTDAWKEA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtggcagaaagcactttgcgaggcgcgcagggcgagaacctcttagaggtgaatgacctc
tgcgtcactcttttcaccgatgcaggcgagcttccctgcatccagaacctctcctttgtg
atgcgccgtggagagacgttagccgtggtgggggagtctggttgcggcaaatccatgacc
gccctctccatcatgaatctcattcccaagcctcctgcaaagatcgtgggcggcgccata
cgctttgagggcactgacttggtgcagctcagcgaagagcagatgcgcagctatcgcggc
aacgccatctccatgatcttccaagagcctatgacctcgcttaaccccgtgatgctctgt
ggcaagcagatcgccgagggactcctggtgcacaacaaggagatgtccaagcaagaggct
gatgagcgcgctcttgagatgatcaaattcgtgggcattcctgctcccgagaaggtcgcc
cacagctatccctttgagctctctggcggcatgcgccagcgcatcatgatcgctatggct
ctcgcttgcagccctgccatgctcatctgcgacgagcccaccaccgctttggacgtcacc
attcaggcccaggtgctccagctcatcgacaagatgcgcgaggagacaaacactgccgtc
atgctcatcacccatgacatgggtgtagtctccgagatggctgattgggttttggtcatg
tatgcaggccgccaagtggaatacacccgttccccagtgctcttcaagcatccggcgcat
ccctatacccaaggcctcatcgactccattccctctatggagtcctctagtggcgagctc
tatgccatacctggcaatgtgcctatgctctcagaccttccttcgggatgtctcttccat
cctcgctgccctcatgccaaaggcatctgcaccaaacagtgcccccgcttcactccggtt
gagggcgacgagaaccaccaggtagcttgttggatgtataccgatgcctggaaggaggcg
taa
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