KEGG   Leptogranulimonas caecicola: ATTO_09110
Entry
ATTO_09110        CDS       T08581                                 
Symbol
polA
Name
(GenBank) DNA polymerase
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
lcal  Leptogranulimonas caecicola
Pathway
lcal03030  DNA replication
lcal03410  Base excision repair
lcal03420  Nucleotide excision repair
lcal03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lcal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ATTO_09110 (polA)
   03410 Base excision repair
    ATTO_09110 (polA)
   03420 Nucleotide excision repair
    ATTO_09110 (polA)
   03440 Homologous recombination
    ATTO_09110 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lcal03032]
    ATTO_09110 (polA)
   03400 DNA repair and recombination proteins [BR:lcal03400]
    ATTO_09110 (polA)
Enzymes [BR:lcal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     ATTO_09110 (polA)
DNA replication proteins [BR:lcal03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     ATTO_09110 (polA)
DNA repair and recombination proteins [BR:lcal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     ATTO_09110 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ATTO_09110 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc HHH_5 HHH
Other DBs
NCBI-ProteinID: BDC91039
UniProt: A0AAU9D7J4
LinkDB
Position
complement(1045630..1048347)
AA seq 905 aa
MTGSNTGSTSPTQTSSHASPAGSSSLPQDGRPKVAVVDGNSLMHRAFHAISAQMTSPQGV
PTNAVFGFLSMFLKLVEDFKPWGVAVCFDKGKPKVRMEMLPSYKAQRPPMDPDLAPQFGE
IKDVLAALSVPVFELEGWEGDDLLGTLARQGAAEGYDMLLVTGDRDMYQLSNEHVQIVST
RKGMSDVQIMTPAAVEDLYGGVTPELVPDFYGLKGDSSDNIPGVPGIGPKKAQQLLATYG
TLDEVLAHADEVKGKMGENLRAHKEDALLSRKVATIRTDAPLDVDLAETRFPTFDVPTAK
EALTALGFTSIATRLLSLADGGQVSEASLTLEVPETLEGEAAQEAWQKAITEGAWLGCAL
EVPETQSLFGPSSRLWVATPTHLLRFEGAEATDRLVDALSSHRVASCALKDLIHQVYPMD
SSQPAALDIDRVAPDAIFDCGVAAYLLDSTKTEYAPDDLAQEWLELSRPQDVKDAPFSAL
VAQRCVEPLSVALDKTGSKPCFFEIEMPLLPVLAQMERTGMHADASVFAEQDAQLQAQLS
ILAQQIYETAGQEFNIGSPSQLSNVLFDGLGLPTAGLKKTKRGYYSTNAKVLEELAQTYP
VVAQVIEWREKSKIARTYLAALPQEIRADGRIHTTFNQTVTATGRISSSDPNLQNIPVKS
EEGRRVRSAFTVPQGWKFLAVDYSQIELRLLAHLSGDEHLIKAFVEGEDFHAETAARVFG
VPVSEVTPALRSRAKAVNFGIVYGQQGYGLAQTLHIPQKEAQEIIDSYYRAYPGVRAYLD
ETVEEARKLGFVSTMWGRRRLVPDIGARNAMVRSAAERTAMNHPMQGSAADIIKIAMSRV
EQALNQGNYQSELIMQIHDELDLQVPETELEEVAALVKATMESVVDLRVPLVADVSWGNT
WAEAK
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgactggatcaaacacgggtagcaccagccctactcagacttcaagccacgcatctcct
gcaggctcctcttcgcttcctcaagacggtcgccccaaagtggcggtggtagacggcaac
tccctcatgcatagggcctttcacgccatatctgcccagatgacctctcctcaaggggtg
cccaccaacgccgtctttggctttctctccatgtttctcaagctggtggaggacttcaaa
ccctggggcgtcgcggtgtgctttgacaagggcaagcccaaagtgcgtatggagatgctc
cccagctataaagcccagagaccgcccatggaccccgatctggcgcctcagtttggcgag
atcaaagatgtgctggctgctttaagcgtgccggtcttcgagctggaaggctgggagggc
gacgaccttctgggtacgctggctcgccaaggagctgccgaaggttatgacatgcttctg
gtcaccggcgaccgcgacatgtaccagctctccaatgagcacgtgcagatagtctccacc
cgcaagggcatgagtgatgtgcagataatgactcccgccgcagtagaagatttgtatggc
ggcgtgacaccagagctggtgccggacttctatggccttaaaggcgatagctcagacaat
atcccaggcgtacccggcattggtcccaagaaggcccagcagctgctggccacctatggc
accttggatgaggtgctggctcatgcagacgaggtcaagggtaagatgggcgaaaacttg
cgagcccacaaagaggacgcgttgctctcgcgcaaggtggcgaccatccgcaccgacgcc
cctctggatgtggaccttgcagagaccagatttcccacctttgatgtgccaactgccaaa
gaggcgctgactgccttgggcttcacgtccattgccacgcgccttttgagcttggccgac
ggcgggcaggtctctgaggcctccctgaccctggaggtccctgagactctggagggcgag
gctgcccaggaggcgtggcaaaaggcgataactgagggtgcctggttaggctgtgcgctg
gaagtgccagagactcagagcctctttgggccttcttcacgactctgggtagccacgccc
actcatctgctgcgcttcgagggcgccgaggccaccgatcgtctggtggatgccctgagc
tctcacagggtggcttcctgcgccctaaaagatctcattcaccaggtctatcccatggac
tcttcgcagccagccgctctagacatcgaccgggtggctcccgatgccatcttcgactgc
ggggtggctgcttacctgctagactccaccaagaccgaatacgcccccgacgacctcgcc
caagagtggctggagctctcccgccctcaggatgtgaaggatgcgcccttctcggcattg
gtggcccagcgctgcgtggagcccttatcggtagctttggacaaaacggggtccaagccc
tgcttctttgagatcgagatgcccctgttgcccgtcttggcacagatggagcgtactggc
atgcatgcagacgcttccgtctttgccgagcaggacgcacaactgcaggcccaactatca
atcctggcccagcagatttacgagactgcgggtcaagagttcaacatcggctctccctcg
caattgtctaatgtgctgtttgatggtctggggttgcctacggcagggcttaagaaaacc
aagcgcgggtactattccaccaatgccaaggtgcttgaggagctggcgcaaacctatccg
gtggtggctcaggtcatcgagtggcgtgagaaatccaagattgcacgcacgtatctggcg
gcattgccccaagagattcgggctgacgggcgcatccataccactttcaaccagacggtg
acggctacggggcgcatctccagctcagatcccaacttgcagaacattcccgtgaagtct
gaagagggccgacgcgtgcgctccgccttcaccgtgcctcagggctggaagttcctggcg
gtggactactcgcaaatcgaactgcgtctgctggcgcatctctcgggcgacgagcacctt
ataaaggctttcgtggaaggggaggatttccacgcagagactgcggctcgcgtctttggc
gtgcctgtgtctgaggtgactcccgcgctgcggtctagggccaaagcagtgaactttggc
attgtctacgggcagcagggctatggcttggcacaaacccttcacattcctcagaaggaa
gctcaggagatcatcgactcctattaccgtgcctatccaggggttcgcgcttatttggat
gaaacggtggaagaggctcgtaagctggggtttgtaagcaccatgtggggtcgtaggcgc
ctggtgccggacattggggcgcgtaatgccatggtgagatcggccgctgaacgcactgct
atgaaccatcctatgcaggggagtgccgccgatatcatcaaaatagctatgagtcgcgtg
gaacaggcgcttaaccagggcaattaccaaagcgaactcattatgcaaatccacgacgag
ctggatttgcaggtgcccgagacagagctcgaggaggttgcggcattggtgaaagccact
atggaatcggtggttgacctgcgggttcctttggtagccgacgtttcttggggcaacact
tgggccgaagccaagtaa

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