Leptogranulimonas caecicola: ATTO_13160
Help
Entry
ATTO_13160 CDS
T08581
Name
(GenBank) hypothetical protein
Organism
lcal
Leptogranulimonas caecicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
Flg_new
GramPos_pilinBB
Big_13
aRib
Motif
Other DBs
NCBI-ProteinID:
BDC91444
LinkDB
All DBs
Position
complement(1476600..1482236)
Genome browser
AA seq
1878 aa
AA seq
DB search
MKRKGLATKIFAWLLSFVMALTLVPVAPQPALAENGARSVSAQADSDDLQFKEGHIKVSG
KVTVASDKQLVQDLKWTFPFENPLRPGEGIADPGRPYKYIIWQSKKATSSNAWSAWESRS
AYSDSNKIRVLNVAPNGASTAYLKNWMNTPTTDPTTGQRVTVGRDLMDITAITLADYNAN
PNGYLMETVKDAQGNDIQQYKYDVIMFGTYDANAGGDLNAASRDATVAFAKHGGGLMFGH
DTITGSSSSTSDPYADNASKQLHHPYFNRFAREDFLDIFPGQGGTTYMLNNCKVIDTGFL
TSRPWDLNGKTLSIPTTHVLGQRVLAGSNARVWMQMSDGAGNVQGIRFTQGNGTDNYYLV
TNGSNAMIQTGHSNGSATEDECKVFANTLLYIAQGSRYTSGSDLSFADEDAPSAANASLR
RVNLTPDGWHYSATLNLRGSVDAGTQFAYKIQGIPQATLQNAPEYVEVWSDPETLDDAPA
DKTASLVQTALSGLRGYYVRAVDTNKDPEAITKSQVNASQIISASNSTDTVTYTSAQNLN
LDTQYYAHVYAVDWAGNVSGDMVVPIQVLERRAHFHRNEDGTSEPATADDEAQSLFTNNH
IIASYPDDPVREGYRFDGWYLNNAGTGEKIVPEGTYPPSGADTKEPFHVYAKWVKTWDLL
VSQKGNGTTSIQVEGQDPAPIDSQAHTYDTGTKLSVNLKAAEGGSIGAVWLDDELLDPAR
YAGGTLNLGALEASHHVVVEYLSAPVDPVDYAQVATKLTGDAGSSTITKSTIVATDDSGA
SNYKVEWKLDSTRELEMIYIDGVERPDLVAAGATSVTFSQVDRDHEVEVKLKPTGTSSSE
GDHQVATRLTGGPGTVSPTVRVADGEGTTVTAAIDPEYASSYDIKQENITVTDADGAKVN
PTSITVQDDGSVAIELPAGSKDCTVEVKLTPKDQAGNVTLSEEEQISIDTRVTGQGTITP
SAIVKRGSDYPVEWEPAEGWMLQGVTIDTVRSFYPERSLADRLSTKETDVSQSQNLLRSM
LKMASPECLSSLLADGPGDPAVSEDPVAPKPDAVIDDTGSYPFYKVDRNHTIHATFVKAD
VITTKPEDHQEDTCRVETQIVSEGPGSITASANALAKGSNYPVSWDVPEGFTVTGVFVNG
QARPDLLTAGSVSLNDLQADASVKVVVEKTRAGSGLKVKELPDGIAAFVYNGTQPGSKVL
STLESLNENEAAAWATSLAEKHNRSFLGWTTTPEAPVLLTTNDVLSQGYTTVYPVFGASA
HKGAPSNTPSGPADPENPDNPDNPDDPSDPDNPGGPDDPDNPSDPDSPDKPVDPESEPID
PDTPNVTPTHDPTIDPSKEGDTFITKVLRNLTHPRGVNRIGDTVRYYITAQNNRLTNWQN
VTVSDPLPVGVVPQAGTMKLIVRDLANLEGGTALAVPDSAYDAATRRVTYSLGDVAPGTA
KTLVFDASLTTDALQDQPLGTPVQNSASVLGTTDGTRTPEDPSHPDDPDLPDVPAGPTGG
LTTDVVLPDDGAVHWASPDISIIKDAQNLTALGAPITRVGDRLAYAIELKTTKDDSAIEN
GLITDTLPEGLEIDLSTLKLQIKEGEPFSVAPEAYDPETRTLSVTCGTLMKGEVAKLTFE
ATVTQAAHGLMIPNVAVGTNLLVGPNDTVKPGDPWTDPVPRGGTESQEAFPGEQDSTHPV
VWADPQLSLEKTAENLTHTDEWYLGDKVGYTVKLVNTLDMSMSFDTLLVDVMSDGLELDT
SSLKLMLPDGTTEPLAMSDVEFDRATNTLRVPVGDLAGGQQVTLTYEAAIREPSMPGKIV
NSVSAVGSGEAGSLAPGEGAAATEIEAKATATATIVYPVNGRFGRLGRMGDEPVFWGALV
LLAAGATTTLVYLRRRRA
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaagggactggcgacgaagatctttgcctggctgctctcctttgtgatggcg
ctcactctggtgcctgtggcgccgcagccggcgttggcggagaatggcgccagaagcgtc
tctgcgcaagcggacagcgatgatcttcagtttaaagaaggccacatcaaggtttcgggc
aaggtgaccgtagcctcggacaagcagctggtccaagacctcaagtggaccttccccttt
gagaatccgctgcgcccgggcgagggcatcgcagaccctggccgcccctacaaatacatc
atctggcagtcgaagaaggctaccagctccaatgcctggagcgcctgggaatccagaagc
gcctacagcgattccaacaagatccgcgtgctcaatgtggcgcccaacggcgcctctacg
gcttatctcaaaaactggatgaacactcctaccacagatcccaccactggccagcgcgtg
acggtgggccgcgaccttatggacatcacggccatcaccttggccgactacaacgccaac
cccaacggctatctcatggaaaccgtgaaggatgcccaaggaaacgacattcagcagtac
aagtacgacgtcatcatgtttggcacttacgatgccaacgccggcggcgacctcaatgct
gcctcccgcgatgccactgtggcttttgccaagcatggcggcggcctcatgtttggccac
gacaccatcaccggctcatcctcatctacctccgatccctatgccgacaacgcttccaag
caactgcaccacccctacttcaaccgcttcgcccgcgaggatttcctggatatcttcccc
gggcagggcggcaccacctacatgctcaacaactgcaaggtcatcgacacgggctttttg
acctcgcgtccctgggacctcaacggcaaaacgctttccattcccaccacccatgtgttg
gggcaaagggtgctggccggctccaatgctcgcgtgtggatgcagatgagcgatggcgca
ggcaatgtgcaggggatccgtttcacgcagggcaatggcaccgacaactactatctggtc
accaatggctcaaacgccatgatccaaaccggccattccaacggatcggctacagaagac
gagtgcaaggtcttcgccaacacactgctctacatcgcccagggctcgcgctacacctct
ggctccgacctctcctttgccgatgaggacgctccctctgccgccaacgcctccctgcgc
cgagtgaatctcactcccgatgggtggcactactcggccacgctcaatttgcgcggctcg
gtggatgcgggcacccagtttgcctacaagatccagggcattccccaggcaaccttgcaa
aacgcccccgagtatgtggaggtgtggagcgatcctgagaccctcgatgacgcccctgcc
gataaaaccgcctccctggtgcagacagccctctctggtctgcgtggttactatgtgcgg
gcagtggacacaaacaaggatcctgaggctatcaccaagtcccaggtgaacgcctctcag
atcatttctgcttccaatagcaccgacacggtgacctatacctcggctcagaacctgaat
ctggatactcagtactacgcccatgtctatgccgttgattgggcaggtaacgtgagtggc
gacatggtggtgcccatccaggtgttggaacgtcgagcccacttccatcgcaacgaggac
gggacctccgagccggcgaccgctgatgacgaggcccagtccctctttaccaacaaccac
atcattgccagttaccccgacgaccccgtgcgcgagggttaccgctttgacggctggtac
cttaacaacgcaggtaccggagagaagattgtgcctgagggaacctacccgccttctggc
gcagacaccaaagagcccttccacgtctacgccaagtgggtgaagacttgggatctcttg
gtgagccaaaagggcaacggcaccaccagcatccaggtggagggccaagaccctgcgcct
atcgacagccaggcccatacctatgacacgggcaccaagctctcggtgaacctcaaggca
gccgagggcggctcaatcggtgctgtctggctggacgacgagctgctggacccagcacga
tatgccggaggcaccctgaaccttggggcgctggaggcaagccatcatgtggtggtggag
tacttgtcggcaccggtggatcctgtggactacgctcaggtggccaccaagcttaccggc
gatgcaggcagctccaccatcaccaagtccaccattgtggccaccgacgacagcggggca
tccaactataaggtggagtggaagctcgattccacccgtgagctggagatgatctacatc
gatggcgtggagcgcccggatctggtagcggcaggggcaacctcggtcaccttctcccag
gtggaccgcgaccacgaggtcgaggtgaagctcaagccaacgggcacttccagctcggag
ggagatcaccaggtggccacacgcctcacaggaggtcctggtacggtgagccccacggtg
cgcgtcgctgatggcgagggcaccacggtcaccgcagccatcgaccctgagtacgcctca
tcctatgacatcaaacaagaaaacatcaccgtcaccgacgccgacggcgccaaggtgaac
cccacaagcatcacggtgcaagatgacggttcggtggctatcgagctgcctgccggctcc
aaggactgtacggtggaggtcaagctcacgcccaaggatcaagcgggaaacgtcaccctt
tccgaggaggagcagatttccatcgacacccgggtgacaggccaggggaccatcacgccc
tcggccatcgtcaagcgcggcagcgattaccccgtggagtgggaacctgccgaaggctgg
atgctccaaggcgtgaccatcgacacggttcgttccttctatcccgagcgctccctggcc
gatcgcctgtccaccaaggagaccgacgtctcacagagccagaacctgctgcgttccatg
ctcaagatggcctcgcccgagtgcctgagctcccttctggccgacggccctggcgatccc
gctgtcagcgaggaccctgtggctcccaagcctgacgcggttatcgacgatacgggctcc
tatcccttctataaggtggatcgcaatcacaccatccatgccacattcgtgaaggccgat
gtcatcactaccaagcccgaggaccaccaagaagacacgtgccgcgttgagactcagatc
gtgagcgagggccccggctccatcaccgccagcgccaacgcactggccaagggctcaaac
taccctgtatcctgggacgttccggagggcttcaccgtcaccggtgtctttgtgaacggt
caggctcgtcccgacctccttaccgccggctctgtgagcttgaacgacctccaggccgac
gcctccgtcaaagtagtggtcgagaagacccgcgccggctccggcctcaaggtcaaggag
cttcccgatgggatcgcggcctttgtctacaatggcacccagccgggctccaaggtgctc
tccacgttggaatcgctcaatgagaacgaggctgccgcctgggcgacttcccttgccgag
aaacacaaccgctccttcctggggtggaccactacgccggaagccccggtgctcctgacc
accaacgacgtgctctctcagggctataccacggtctatcccgtctttggagcctctgcc
cacaagggtgcgccttccaacacgcccagcggccccgcagacccggaaaacccggataat
cctgacaacccagacgatcccagcgatcctgacaaccctggcggcccggacgatcccgat
aaccccagcgacccagattcgcccgacaagcccgtcgatcctgagagcgagccgatagac
ccggatacgcccaacgtcacccccacgcacgaccccaccatcgatccttccaaggagggt
gacacctttatcaccaaggtgctgcgcaacctcacccatcctcgcggcgtgaaccgcatc
ggcgacacggtgcgctactacatcaccgcacaaaacaaccgcctcaccaactggcaaaac
gtgacggtttctgatcctctgccggtgggtgtggtgccccaggcaggaaccatgaagctc
atcgtgcgcgatcttgccaacttggagggcggcactgcattggcggtacccgacagcgcc
tatgacgctgctactcgtcgtgtgacttacagcttgggcgacgtggcgcctggcaccgct
aaaaccttggtgttcgacgcttcgcttaccaccgacgctctccaggaccagcctttgggc
accccggtgcaaaacagcgccagcgtgttgggcaccaccgacggcactcgcacgcctgaa
gatcccagccaccccgatgaccccgatcttcctgacgtccctgcaggccccaccggcggt
ctcaccaccgacgtagtgctgcctgacgacggtgccgtccactgggcgtcgccagacatc
tccatcatcaaggacgcacagaacctcacggccctcggtgcccccattacccgcgtgggc
gaccgcctggcttatgccatcgagctcaagaccaccaaggatgactccgccatcgagaac
ggccttatcaccgacacccttcccgaaggtctcgagatcgacctttccaccctcaagctc
caaatcaaggagggcgagcccttctcggtagcccctgaagcctacgaccctgagacccgc
accttgagcgttacctgcggcaccctcatgaagggcgaggtcgcaaagctcacctttgag
gccactgtcacccaggcagctcacgggctcatgatccccaatgtggcggtgggcacaaac
ttgctggtaggacccaatgacacggtgaagcccggcgacccctggaccgatcctgttcct
cgcggtggcactgagtctcaagaggcgttccccggcgagcaggactccacgcatccggtg
gtgtgggcagatcctcagctctcgctcgaaaagactgccgagaacctcactcataccgat
gagtggtatctgggtgacaaggtgggctataccgtcaagctagtaaataccctggacatg
tctatgagcttcgacacgctactggtagacgtcatgagtgatgggctcgagctggatacc
tcttcgctcaagctcatgcttcccgacggcactacggagccgctggctatgagcgacgtg
gagtttgaccgcgcgaccaacaccctgcgtgtgccggtgggcgatcttgccggtggtcag
caggtgaccttgacctacgaggctgccatccgcgagccctccatgcctggcaagatcgtc
aacagcgtctcggcggtgggctcgggcgaagctggctcccttgctcccggtgaaggtgct
gccgccaccgagatcgaggccaaggctactgccactgccactatcgtgtacccggtgaac
gggcgcttcggccgcttgggccgcatgggcgacgaacctgtcttctggggtgcgctggtg
cttttagctgcgggtgccaccactaccctggtttacctgcgtaggcgtcgcgcctag
DBGET
integrated database retrieval system
