Lysinibacillus canaveralius: AA0Y26_02885
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Entry
AA0Y26_02885 CDS
T11879
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lcan Lysinibacillus canaveralius
Pathway
lcan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lcan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AA0Y26_02885 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcan03400
]
AA0Y26_02885 (uvrB)
DNA repair and recombination proteins [BR:
lcan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AA0Y26_02885 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AA0Y26_02885 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
HEM4
AAA_30
AAA_19
AAA_22
UB2H
DUF7934
AAA_7
AAA
TrwB_AAD_bind
AAA_16
UvrD-helicase
HH_RND_rel
DUF87
CsgA
AAA_5
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
XNQ11252
LinkDB
All DBs
Position
591976..593958
Genome browser
AA seq
660 aa
AA seq
DB search
MNEKFEIQSHYQPSGDQPAAIVELVKGVKEGKRHQTLLGATGTGKTFTISNVIKEINKPT
LVMAHNKTLAGQLYSEFKEFFPDNAVEYFVSYYDYFQPEAYVPQTDTYIEKDSSINDEID
KLRHSATSALFERKDVIVIASVSCIYGLGSPEEYREMLVSIRTGMEIERNQLLRRLIDVQ
YERNDINFTRGTFRVRGDVVEIFPASRDERCIRVEFFGDEIDRIREVDALTGEVLGEREH
VAIFPASHFVTREEKMVQAIERIEKELEEQLEKFRAEGKLLEAQRLEQRTNYDLEMMREM
GFCSGIENYSRHLTLREKGSTPYTLLDYFPEDFLLVVDESHVTLPQVRGMYNGDQARKQV
LVDHGFRLPSALDNRPLKFEEFQSKVSQAIYVSATPGPFELEHTPEMVEQIIRPTGLLDP
TIDIRPIEGQIDDLIDEIQERIRRNERVLVTTLTKKMSEDLTDYLKQMGLKVEYLHSEVK
TLERIEIIRELRKGTHDVLIGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR
AARNSNGHVIMYANNMTDSMKKAIDETKRRRSIQEAYNEEHGIEPKTIIKKIPEVIRATQ
AAEEEATYVTKVTKGKKLTKAEIDKLVETLEQEMKEASRALDFERAAELRDTIFELKAER
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaaatttgaaatacagtcccactatcaaccgagcggagatcagccggcagca
attgtcgagctggtaaaaggcgtaaaggaaggaaaacgtcatcaaacattgctcggtgca
acaggtacagggaagacgtttacgatttcaaacgtcattaaagagataaataaaccaaca
ttggtcatggcgcacaataaaacattggccggccagctttacagtgagtttaaagagttc
ttccccgacaatgcggttgagtattttgtcagctactacgactacttccagccggaagcc
tatgtcccgcaaacggatacctatatcgagaaagattcgagcatcaatgatgaaatcgat
aagcttcggcactccgcgacatctgctctattcgagaggaaggatgttatcgttattgcc
tctgtgtcctgcatttacggtttaggttccccggaagaataccgggagatgcttgtctcg
attcgtacaggaatggaaatagaacgcaatcaattattaagacgcctgatcgatgtgcag
tatgaacgcaatgacatcaattttacacgcgggacattccgtgtgcgcggggacgtagtg
gaaatcttcccagcttctcgagatgaacgatgcattcgtgtggaattcttcggtgatgaa
attgatcgtatccgtgaagtggatgcactgacaggggaagtacttggcgagcgcgaacac
gtagcaattttccctgcttcccacttcgtaacgcgtgaagagaagatggtacaggcaatt
gaaagaattgaaaaggagctggaagaacagctcgaaaaattccgtgcagaaggcaagcta
ttagaagcacagcgcctcgagcagcgcacgaactacgatctagaaatgatgcgtgaaatg
ggcttctgttcgggtattgaaaactattcccgtcatttaacattacgtgagaaaggttcg
acaccgtatacattgcttgactacttcccagaggatttccttcttgtagtcgatgaaagc
catgtcacattgccgcaggtgcgcgggatgtataatggtgaccaggcacgtaaacaggta
ctagtcgatcatggcttccgtctcccctcagcacttgataaccgcccgctgaaatttgaa
gagtttcaatcaaaagtgtcgcaggcgatttatgtttcggcaactccggggccatttgag
ctggagcatacacctgagatggtcgagcaaattattcgtccgacaggtcttcttgatcca
acgattgatattcgtccgatcgaggggcaaattgacgatttaatcgatgaaattcaggag
cgtataagacgtaacgagcgtgtccttgtcacgacgctgacgaagaaaatgtctgaggat
ttaacggattacttgaagcaaatgggcttaaaagtggaatacttgcactcagaagtcaaa
acgctggagcggattgaaatcatccgggagctgcggaaggggacacacgatgttctcatt
ggaattaacctgctgcgggaagggctggacattccggaagtgtcgcttgtcgcaatttta
gatgctgataaagaagggttcctgcgttcggagcgctcgttgattcaaacgattggacgt
gccgcgcgtaactcgaatggtcatgtcattatgtatgcaaacaacatgacagattccatg
aagaaggcgatcgatgaaacgaagcgccgccgttccatccaggaagcttacaacgaagag
catggcattgaaccgaaaacaattattaagaaaattcctgaggttatccgtgcaacacag
gcggcagaagaagaagcaacatatgtaacaaaagtaacaaaaggcaagaagctgacaaag
gcggaaatcgacaagcttgttgagacgcttgagcaggaaatgaaggaagcttcgagagcg
cttgatttcgaacgagctgcggaacttcgagatactatttttgaactgaaggcagaaagg
tga
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