Lysinibacillus capsici: ICJ70_02140
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Entry
ICJ70_02140 CDS
T08448
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
lcap
Lysinibacillus capsici
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcap03000
]
ICJ70_02140
Transcription factors [BR:
lcap03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ICJ70_02140
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
Peripla_BP_2
AraC_binding
UBL_UBAC1
ExsA_N
RdDM_RDM1
Motif
Other DBs
NCBI-ProteinID:
UNT55921
LinkDB
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Position
complement(401264..402835)
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AA seq
523 aa
AA seq
DB search
MGNLTHVYTLQNISYAIQSSKKLLISSDFYTLFIVMNGSGKLEIDHDTIHFSEEKCILIP
PNNTVSIHIQSEHLCFYQLQFNIVNLSNSQNSHSHFTSISERHLLPFSQCHRLLEVIYQN
RLAEDEHTIFEQHVHFQELMLLLLHQTIPKQMQKNDRQSVEQSINHLHKHYEKEWTVEQL
AQLADVPRWNYTRIFKDITGQIPLHYLTNIRIEKAKQLLMTTNDRVFEISQSVGFNNEYY
FNRRFKEHVGISPGQYRRNQGSHLRVFAPFLEDFFVALGITPIAQFSHSKWGKQDYLGLQ
EVPDIDVQNREIDRLLYYKPTLIMLDSGIERWESFHHLDEVAPVCHLSHPGENWQSTLFK
IADLTGKTSLMQDVILQYEDKVQQAKGILSKSVYGQSVAFLRISAIGITLYAGPECGYTG
PILYRDLGLMPHSLVLSIPHNQRKVQLTFAQLLQLDADHLFITFDKQHSIYENEERAILK
TPTWKNLAAVKSNCIYEVDFLTWMNYGILSHSKKIDDVLNVLG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacttaacacatgtttatacgttacaaaatatctcttatgcaattcaatcatca
aaaaagttattgattagtagtgatttctatacacttttcatcgtaatgaatggtagcgga
aagctagaaatagatcatgacaccattcattttagtgaagaaaagtgcatattgataccg
ccaaataacacggttagtatccacattcaaagtgagcacctttgtttttatcaattacaa
ttcaacattgtcaatctcagcaatagtcagaattcacatagccattttacaagtatcagc
gaacgacatcttctccccttttcacaatgtcatagactgctagaagtcatctatcagaac
cggttagcggaggatgaacacacgatttttgaacagcatgtgcactttcaagaactgatg
ttattgctcttacatcaaaccatacccaagcaaatgcaaaaaaatgatcgccaatctgtt
gaacaatccattaaccatttacataaacattatgaaaaggagtggacggttgagcagcta
gcacagctcgctgacgtaccaagatggaattatacgcgtatttttaaagatattacggga
caaattcctcttcactatttaactaacattcgtattgaaaaagctaagcaactattaatg
acaacaaatgatcgagtatttgaaattagccaatctgtcggatttaataatgagtattat
ttcaatcgtcgttttaaagaacatgtcggcatctctccaggacaatatcgaagaaatcaa
ggcagccatctacgtgtatttgcaccattcttagaagatttctttgttgcccttgggatt
acgccaattgctcaattcagtcattcaaaatggggaaaacaagactatttaggtctacag
gaagtgccagatatcgatgtacaaaatagagaaatagatcgactcctttactataagcca
actttaattatgctagattctggtatagagcgttgggaatcctttcatcatttagatgag
gtagcccccgtctgccacctctcacaccccggagagaattggcaatctactttatttaaa
attgcagatctaacaggaaaaacctctttgatgcaagacgtaatcctacaatatgaagat
aaagtacaacaagcaaaaggaattcttagcaaatctgtttatgggcaaagtgtggcattt
ctccgtatttcagccattggcattactctatacgcgggccctgaatgtggctatacgggc
cccattttatatcgtgatttaggtttaatgccacattcactagtattgagtattccgcac
aatcaacgtaaagttcaactgacatttgctcaattgttgcaattagatgctgatcattta
tttattacctttgataaacaacattccatttatgaaaatgaggaacgtgctattttaaaa
actcctacttggaaaaacctggctgccgttaaaagcaactgtatctatgaagtagacttt
ttaacatggatgaattatggcattttatcacatagtaaaaaaattgatgatgtcttgaat
gtacttggctaa
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