Lysinibacillus capsici: ICJ70_03285
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Entry
ICJ70_03285 CDS
T08448
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
lcap
Lysinibacillus capsici
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
PAS
PAS_9
Mg_chelatase
PAS_10
HTH_30
AAA_2
AAA
AAA_16
HTH_22
PAS_4
HTH_11
PAS_8
nSTAND6
GAF_PdtaS
Exo_endo_phos_2
AAA_3
Motif
Other DBs
NCBI-ProteinID:
UNT57752
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Position
complement(622759..624450)
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AA seq
563 aa
AA seq
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MNKMLKRNFAFIPIEEVITKMNNDKIQYFVIENDKPYAVKRGKRKSDINYIACQIVRMDC
PLKTALDYLEEYEYLLVRDEEKKYIGYLWKESLMHDLAYELECTNAYLNTILETINESCT
VIDGNQNVIYWTKGAESIFSVSGNHIIGQPITNFFKEDQLEILHTLQHGKSVYQQQHFPR
EDLVVMINSNPVMLNDKTIGAVVAETDITHVKKLNEELHITSEKLLNLEKQMNTNGLAYD
PFTLIRGNSPQLKNVLEKVKKVAETEANILIYGESGVGKELFARAVHAIREKPEAPFVAI
NCGAIPSGLFESEIFGYEKGAFSGAHQKGKKGKVELARGGTLFLDEIGEMPLDMQVKILR
LLQEKTFYAVGGTKEMDVDFNLVAATNRDLKQLVAEGKFREDLYYRLNVVNFTVPPLRER
ASDILEISNYFLYEKSIKYNRPIQGIPPEIVNILLHYQWPGNVRELSNVIERLVVFSNEG
AIHVEDLPADILAAVPKAELLEVPKDLPHSNGTQLSEQLEHYEREIILQQLTSVNGNKKM
CAKKLGITRATLYNRLKRLNIDV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatgctaaaacgaaatttcgcttttatccctatagaagaagtcattactaaa
atgaataatgataaaatacagtattttgttattgaaaatgacaaaccttatgccgttaaa
agaggcaaacgaaaaagtgatattaactatatcgcctgtcaaattgttcgtatggattgt
ccgctcaaaacagcgcttgattatttagaggaatatgagtatttacttgtgcgtgacgaa
gaaaaaaaatatataggttatttatggaaagaatccttaatgcatgatcttgcctatgaa
ttagagtgtactaacgcttacttaaacactattttagaaaccattaatgaatcatgtact
gtcattgatggtaatcaaaacgtcatttattggacaaaaggtgccgaaagtattttttct
gtatctggcaatcatattattggacaacctatcacgaatttctttaaagaagaccaactt
gaaatattacatacattacagcatgggaaatccgtttatcagcaacaacattttcctcgt
gaagatcttgtcgtgatgattaattcaaatcctgttatgttaaatgataaaacgattggc
gcagtggtggcagagacagatattacgcatgtaaaaaaattaaacgaggagctccatatt
acatcggaaaaattactgaatttagagaaacagatgaatacgaatggcttagcgtatgat
ccttttacattaatccgtggcaatagcccacagcttaaaaatgtgcttgaaaaagtaaaa
aaagtcgctgaaacagaagccaatattttaatatatggtgaaagcggggtcggcaaagag
cttttcgctcgagccgtccatgccattcgagaaaaacctgaagcgccctttgtagcaatc
aactgtggggccattccaagtggcttatttgaaagtgagattttcggttatgaaaaaggg
gccttttctggtgcccatcaaaaaggaaaaaaggggaaagttgagttagcacgtggcggc
accttgtttctagatgaaattggggaaatgcctttagacatgcaagtgaaaattttgcga
ttgctacaagaaaaaacattttatgctgtcggtggcacaaaagaaatggatgttgatttt
aatttagttgctgctacgaatagggacttaaaacaattagtagcagaaggaaaatttaga
gaagatttatattatcgtttaaatgttgtaaatttcactgttcccccattacgagagcgt
gcatcagatattttagaaattagtaactattttttatatgaaaaatcgattaaatacaac
cgccctattcaaggaattcctcctgagattgtcaatattctattacactatcagtggcca
ggaaatgtacgtgaacttagtaatgttatagaacggctcgttgttttttcaaatgaggga
gccattcatgtagaagatttaccagccgatattttggcggctgttcctaaagcagaacta
ctagaggtaccaaaagacttgccacatagcaatggcacccaattaagtgaacagcttgaa
cattatgagcgagaaattattttgcaacaactgacttctgtgaatggcaataaaaagatg
tgtgcaaaaaaattaggcattacacgcgccactttatacaaccgattaaaaaggctaaat
atagatgtctaa
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