Lysinibacillus capsici: ICJ70_03315
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Entry
ICJ70_03315 CDS
T08448
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
Organism
lcap
Lysinibacillus capsici
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
HTH_IclR
Sigma70_r4
HTH_23
HTH_AraC
LacI
HTH_38
HTH_Tnp_ISL3
HTH_31
HTH_Crp_2
Phage_CII
Motif
Other DBs
NCBI-ProteinID:
UNT56130
LinkDB
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Position
complement(630208..631494)
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AA seq
428 aa
AA seq
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MHLSMKQTQDLNLVMTVQLRQAIELLQYSTQELEQFIREQELMNPLIALTEPTVPERMPT
SKTITGQTNMVDTLSTYEQNIRDELFEQVKLTFSKDTDIKLLKHIIYHLDDNGYYEPPIV
PIYKEHEIHKGIHLLQTIGPLGVGARSLQECLLLQTIYRHDSPKHTDEVIANHLEAFANK
KWQQIANELHISLCDMQAIYQFILTLQPKLSSLFHQEAIQHNTPDIIVQVKDNVITFSLT
DFYLPKLKLHPDYVPYITSNSSDKGYFKKHLSDYQWLVNSIEQRRLTIIKIMTALIDKQK
AFFTHGFAALQPLTLREVAEQIGVHESTVSRVTTNKYVQTPYGTYELRDLFTSKLQTTTG
DSVSQVKVKSLLTDYIKNENKNKPLSDQKIANYFKMSHGIEISRRTITKYREEMNIPSSS
RRKEIQFS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcatctatcaatgaaacaaacacaagatttgaatttagtgatgaccgtgcaacttcgc
caagccattgaattgctacagtattctactcaagaactagagcagtttatccgtgaacaa
gaattgatgaatccattaatagcattgactgagccaacagtcccagaacgtatgcctact
tcaaaaactataactggtcaaacaaacatggtagatactttatctacatatgaacaaaat
attcgcgatgagttatttgaacaagtgaagttaacattctctaaagacacagatataaaa
ttacttaaacatattatttatcatttagatgacaacggttactatgaaccacctattgtg
cctatttataaggagcatgaaattcataaaggtattcacttattacaaacaattggacct
cttggtgttggggcacgcagtttacaagagtgtttactgttacaaacaatttatcgtcat
gatagtccaaaacatactgatgaagtgattgccaatcatttagaagcatttgcaaataaa
aaatggcaacaaatcgcgaatgagttacatatctcgctttgcgatatgcaagccatttat
caatttattctaactttacagcctaaactaagttcactgttccatcaagaagccattcaa
cacaatacgccggacattattgtacaagttaaggataatgttattacattttctttaact
gacttttatttgcctaaacttaaacttcaccctgactacgttccatatattacgagcaat
tcttctgacaagggttattttaaaaagcatttatcagattatcaatggctcgttaacagt
attgaacaacggcgccttaccattatcaaaattatgacggctcttattgacaagcaaaaa
gccttttttacacatggctttgctgctttacagcctctcacattgcgtgaagttgctgag
caaattggtgtacatgaatcaaccgttagtcgtgttacaacaaataaatatgttcaaaca
ccatatggtacgtatgagcttcgggatttatttacttcaaaattacaaacaactacaggt
gacagcgtgtcccaagtaaaggtgaaatcactgctgactgactatattaagaacgaaaat
aaaaataaaccgttgtcagatcaaaaaattgctaactatttcaaaatgagtcatggtatc
gaaatttcacgtcgtacgattacaaaatatcgtgaggagatgaatatcccatcatcttca
cgacgcaaggaaattcaatttagttaa
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