Lysinibacillus capsici: ICJ70_08475
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Entry
ICJ70_08475 CDS
T08448
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lcap
Lysinibacillus capsici
Pathway
lcap03030
DNA replication
lcap03430
Mismatch repair
lcap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ICJ70_08475 (holA)
03430 Mismatch repair
ICJ70_08475 (holA)
03440 Homologous recombination
ICJ70_08475 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcap03032
]
ICJ70_08475 (holA)
03400 DNA repair and recombination proteins [BR:
lcap03400
]
ICJ70_08475 (holA)
Enzymes [BR:
lcap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ICJ70_08475 (holA)
DNA replication proteins [BR:
lcap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ICJ70_08475 (holA)
DNA repair and recombination proteins [BR:
lcap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ICJ70_08475 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
UNT57038
LinkDB
All DBs
Position
1686541..1687551
Genome browser
AA seq
336 aa
AA seq
DB search
MISTVWNTIKKGELAPVYLLVGEESYFIDETIKRLKEAMGPEEDLEMTTFDLEEVPVDVV
MDEADTIPFFSERKLIIAKNASFLKATEKGKEKIDHDVKRLETWLSNPSDFSVTVFIAPY
EKLDERKKVTKMMKEHALFVQAETPKEQDLAIWIQGIVKTQGNSITQDAIELLVTMVGAN
MLQLQMEIDKLTLYLGDGGEITTSLVEDLVAKTLEQDAFKMLNAYLANDSVGALSIYHDL
LRQKQEPIMLVGLLASNVRTMSNVFYLLKKGYHPQQIAKNLKIHPYRVKLMIEQRHRPSE
ENLLRALYQLAEVDLQLKSSGGNRERYLELFLLRQL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaacggtttggaatacaataaaaaaaggtgagcttgcaccagtatatttgctt
gttggtgaagaaagctattttatagatgaaaccattaaacgtttaaaagaggcaatgggt
ccagaagaagatctggagatgaccacatttgatttagaagaagtaccagtagatgtggtc
atggatgaagcagataccattccttttttctcagaacgtaagcttattattgctaaaaat
gcttcgtttttaaaggcaaccgagaaagggaaggaaaaaatcgatcatgatgtgaaacga
ttggaaacatggttgtcgaatccttctgatttttccgtaacggtttttattgccccttat
gaaaaattggatgaacgcaaaaaagtgactaaaatgatgaaagagcatgcattatttgta
caagcagaaacaccaaaagagcaggatttagccatatggattcaaggcattgtcaaaaca
caaggtaatagcattacacaagatgctattgaattgcttgttacgatggtcggagccaac
atgctacaattacagatggaaattgacaagctaaccctttatttaggtgatgggggcgaa
attacaacttctttagtggaggatttggtggcaaagacattagagcaagatgcctttaaa
atgcttaacgcatacttggcaaatgactctgtcggagccttgtccatctatcatgattta
ttgcgacaaaaacaagaacctattatgttagtgggcttgctagcatccaatgttcgtacc
atgtcaaatgttttttatttattgaaaaaaggttatcaccctcaacaaattgctaaaaat
ctaaaaattcatccgtatcgcgtcaaacttatgattgagcaacggcatcggccttcagaa
gaaaatttgctccgggcattatatcaattagcagaggttgatttacagcttaaatcgtct
ggtggaaatcgagagcgctatctagagctatttttattgcgccaactatag
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