Lysinibacillus capsici: ICJ70_12095
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Entry
ICJ70_12095 CDS
T08448
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lcap
Lysinibacillus capsici
Pathway
lcap03420
Nucleotide excision repair
lcap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ICJ70_12095
03430 Mismatch repair
ICJ70_12095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcap03400
]
ICJ70_12095
Enzymes [BR:
lcap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ICJ70_12095
DNA repair and recombination proteins [BR:
lcap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ICJ70_12095
MMR (mismatch excision repair)
Other MMR factors
ICJ70_12095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
nSTAND3
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UNT57718
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All DBs
Position
2404747..2406903
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AA seq
718 aa
AA seq
DB search
MNGAQKAFFEEKERSLGVYLNDVQKQAVLQTNGPLLLLASPGSGKTTTIIMRIGYMIEML
GVKPARIKAVTFSKASANDMRARFAKFFPHLPPVDFSTIHSLAFQVVRETLERQGISYGI
MEEADKPGVMSKKRVLREIFEQLNGLKITEDQLEELLTYITFIKNKMLPEQEWAMAEVKV
PKKVEILQRYEEYKRTGCDRLLIDFDDMLLMANDIFTKNREVLAQYQRRYDFYLTDESQD
TSPVQHAIIEKLVAVHQNLCVVADEDQAIYSWRGAEPDYLLTFQKIYPDAQVLLMTQNYR
SSASIVAPANLFIQRNKKRYNKQMFTQNPAAEPISFKILENYSLQAKYVVNQLKSLSKHG
STAVLYRNNTSAIPLMDALDRAGLPFYMKDSTIRFFTHWVVEDIMNFMRLAYNTKNISIF
EKVYRKMNAYITPTQLKALQKVPEDGCVFTLLLEHVELKDYQPEYIKRIRQTYDSIQFDQ
TTPTAMLEHIRYDFGYERALKKMSEDLGFNYENLLDIVDVLGLIARHTSTMTEFAGRLKY
LENLARTSHLKNEMNAITLTTLHSSKGLEFDRVYLIDLIDGILPSETEEAIEEETRLFYV
GITRAIRHLELISYSKRFKASVVPSIFMKALKQIVSPQELPKKASKSPRKALKQYRNDRT
ITTESALIVGSKVKHVMFGEGKILDVTSSTIKLSFDAGIKQFMMDTCLQQGYLEAVED
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagcgcaaaaagcattttttgaagaaaaggagcgttcacttggcgtttatcta
aatgatgtgcagaagcaggccgtattgcaaacgaatggaccgttgctactattggcatct
cctggttcaggaaaaacgacgacgattattatgcgtattggctatatgatcgagatgctt
ggtgtcaagcctgctcgcattaaggctgttacgtttagtaaggcatcagcaaatgatatg
agggcacgttttgcaaagttttttccacatttgccaccagttgatttctcgacgattcat
agtttagcatttcaagtggtgcgggagacacttgaacgtcagggcatttcgtatgggatt
atggaagaagcggacaagcctggtgttatgtcaaaaaaacgagtgcttcgtgagattttt
gaacaattaaatggcttgaaaattactgaagatcagttagaagagctactgacgtacata
acgttcatcaaaaataaaatgttgccagaacaagaatgggcaatggcagaagtaaaggtg
ccaaaaaaagtcgagattttgcagcgatatgaggaatataaacgcacaggttgcgatcgt
ttgcttattgattttgacgatatgctgttaatggcgaatgatatttttacgaaaaatcga
gaggtgttggcgcaatatcagcgtcgatacgatttttatttaacggatgaaagtcaggat
acatcgccagttcaacacgcgatcatcgagaagctcgtcgcagtccatcaaaatttatgc
gttgttgctgatgaggatcaggctatttatagctggcgtggtgcagagccagattattta
ttgactttccaaaagatttatccagacgcacaagttttactaatgacacaaaactatcgt
tcatctgcctcgattgtagcgccagccaatctgttcattcagcgcaataaaaagcgatat
aacaaacaaatgtttacgcaaaatcctgcagcagagccaatctcgtttaaaatcctagag
aattacagcttacaggccaaatatgtagtgaatcagttaaaaagcttgtctaagcatggc
tcaacggctgttttatatcgaaataatacgtcagccattccacttatggacgcgttagat
agagcgggcctgcctttctatatgaaggattccaccatacgcttttttacgcattgggtc
gtggaggatattatgaacttcatgcgtctagcgtacaatacaaaaaatatctcgatattt
gaaaaagtttacagaaaaatgaatgcttatattacaccaacgcaattaaaggcactacag
aaagtgccagaggatggctgtgtattcacacttttattagagcatgtggagctaaaggat
tatcagcctgaatatattaagcgaattcgccaaacgtatgatagcattcaatttgatcaa
acaacaccaacagccatgctagagcatatccgttatgattttggttatgagcgtgcctta
aagaaaatgagcgaggatctcggttttaattatgaaaatttactagatattgtggatgta
cttggactaattgctcgccatacgtcgacgatgactgaatttgcgggtcgtttgaagtac
cttgaaaatttagcacgtacatctcatctgaaaaatgaaatgaatgccattacattaaca
accttacacagttcaaaaggcttggaatttgatcgtgtgtatttgattgacttaattgat
gggattttacctagtgagacggaagaagcaatagaggaagaaacaaggctcttttatgtc
ggtatcacacgtgcgattcgccatttggaattaatttcgtacagcaagcgttttaaagca
agtgtggtgccatcaatattcatgaaagcgttaaagcaaatcgtttcacctcaggaatta
ccaaagaaagcgtcgaaaagtccgaggaaagcattgaagcaataccgtaatgatcggaca
attacaacggagtcagcgttaatcgttggctcaaaggtgaagcacgtgatgtttggagaa
ggcaaaattttggacgttacaagtagcacgatcaaattgtcctttgatgcagggataaag
cagtttatgatggatacatgtttacagcaaggctatttagaagcggtggaagattaa
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