Lysinibacillus capsici: ICJ70_12410
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Entry
ICJ70_12410 CDS
T08448
Symbol
lsa
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
lcap
Lysinibacillus capsici
Pathway
lcap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ICJ70_12410 (lsa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcap02000
]
ICJ70_12410 (lsa)
01504 Antimicrobial resistance genes [BR:
lcap01504
]
ICJ70_12410 (lsa)
Transporters [BR:
lcap02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
ICJ70_12410 (lsa)
Antimicrobial resistance genes [BR:
lcap01504
]
Gene variants
Macrolide resistance genes
Transporters
ICJ70_12410 (lsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
KAP_NTPase
AAA_29
AAA_15
RsgA_GTPase
Dynamin_N
ABC_tran_Xtn
Motif
Other DBs
NCBI-ProteinID:
UNT53358
LinkDB
All DBs
Position
2467515..2468996
Genome browser
AA seq
493 aa
AA seq
DB search
MSMIQVQNLTFSYPSSFDNIFENVNFQIDTDWKLGFIGRNGRGKTTFFQLLLGKYEYSGK
IISSVDFTYFPYPVSDPNKYTHEIFEEICPQAEDWECLREIAYLHVDAEVMYRPFKTLSN
GEQTKVLLAALFLTEGQFLLIDEPTNHLDTDARKTVSDYLRRKKGFILISHDRSFLDGCV
DHILSINRANIDVQSGNYSSWKLNFDRQQEHEEVTNQRLQKDIDRLKQSSKRSVGWSNQV
EASKNGTTNSGSKLDKGFVGHKAAKMMKRAKNLESRQQRAIEEKSKLLKNVEKTESLKVE
PLACSSKEMVAVTDVSIQYDNHIVNKPISFKVAQGDRIVLDGKNGSGKSSMLKLILGKPI
QHKGSIKLASGLVISYVQQDTSHLKGLLSEFIEEYGIDETLFKSILRKMDFERIQFEKDI
SHYSGGQKKKLLIAKSLCEKAHLYIWDEPLNYIDIYSRMQIEELIKSSHLTMVIVEHDQA
FQQTVATKTVAMS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgatacaagtacaaaacttaactttttcttatccaagcagctttgacaatatt
tttgagaatgtcaactttcaaatcgatacggattggaaacttggatttatcggtagaaac
ggacgaggtaaaacaacattctttcagttgttattaggaaaatatgagtatagcggaaaa
atcatctcttctgtagactttacttatttcccctaccctgtttcagatccaaataaatat
acccacgaaatatttgaggaaatttgtcctcaggcagaggattgggaatgtctacgtgaa
atagcttacctacatgtagatgcagaggtcatgtatcgtccttttaaaacattatccaat
ggcgagcaaacaaaggtgctgcttgctgcgttgtttttgacagagggtcaatttttatta
attgatgagccaaccaatcatctagacacggatgcacgaaagacggtttcagattatctt
cgcaggaaaaaaggatttattttaatttcacatgacagaagctttttagatggctgtgtt
gaccatattctatcgatcaatagagccaatattgacgttcaaagtggaaactattcttct
tggaagttaaattttgatcgacagcaggagcacgaagaagtaaccaatcaacgactgcaa
aaagatatcgacagattaaaacaatcctcaaagcgttcggtaggatggtctaatcaagtg
gaagcctccaaaaatggcacaaccaattcaggttcaaagctggacaaaggctttgtcggg
cataaagcagctaagatgatgaaacgagcaaagaatctggaatccagacaacaaagagct
attgaggaaaaatcaaagctgctaaaaaatgtggaaaaaactgagtcattgaaagtagag
ccattggcatgttcatctaaagaaatggttgctgtaactgatgtatccattcaatacgat
aaccatatcgtgaataagcctattagcttcaaagtggcacaaggggatcgaattgtttta
gatggcaaaaatggaagcggaaaaagtagtatgttaaaacttattctaggtaagcccatc
caacataaaggctccataaagttagcttcaggtctagtcatttcctatgttcaacaggat
acatcccatttaaagggattgttatcggaatttattgaagagtatggtattgatgagacg
ttatttaaatcaatcctgcgcaagatggattttgagcgtattcaatttgagaaggatatc
tctcattattctggtgggcaaaagaaaaagctcctgattgctaaaagcttgtgtgagaag
gctcatttatatatttgggatgaaccactcaattatattgatatctattcacgcatgcag
attgaagagcttataaaaagctcccatctcacaatggtgattgttgagcatgatcaggca
ttccaacaaactgtagcaacgaaaacggtagcgatgtcgtaa
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