Lysinibacillus capsici: ICJ70_12705
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Entry
ICJ70_12705 CDS
T08448
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lcap
Lysinibacillus capsici
Pathway
lcap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ICJ70_12705 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcap03019
]
ICJ70_12705 (recQ)
03400 DNA repair and recombination proteins [BR:
lcap03400
]
ICJ70_12705 (recQ)
Enzymes [BR:
lcap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ICJ70_12705 (recQ)
Messenger RNA biogenesis [BR:
lcap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ICJ70_12705 (recQ)
DNA repair and recombination proteins [BR:
lcap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ICJ70_12705 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
T7SS_ESX_EspC
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UNT53413
LinkDB
All DBs
Position
complement(2528476..2530248)
Genome browser
AA seq
590 aa
AA seq
DB search
MEQARQMLQHHFGYDTFRQGQAQIIEQTLRGQSSLCVMPTGGGKSICYQIPALMLEGLTI
VISPLISLMQDQVEALRTANIPAAYINSTLTAQEVDETMQLASAGYLKLLYIAPERLEST
TFLQVLSYLSVPLLAIDEAHCISQWGHDFRPSYRSIHKLFTLWPQKPTVLALTATATPTV
CDDIRQLLAIDEQATVMTGFSRENLALSVLIGENKERYVKNYVQQNKQEVGIIYAATRKA
VDAIYDVLSRSGEDVAKYHAGLSENLRMAEQERFLKDEARIMVATNAFGMGIDKSNVRFV
LHYQMPRNMESYYQEAGRAGRDGLPSACILLYASGDVQTQRFLIEQSQDEARITQELAKL
QTMVDYCHTEGCLQNAILAYFGEVEEEPCGRCSNCIDGRAVTDVTEDAQKVLACVVRMGQ
KFGKTMVAQVLIGSKNQKIAEFGFARLSTYGILKGQYASKDVSNFIEFLIAEGLLAVKHG
TFPTIYVSAEGKEVLLGNRQVMRKEAVTVKKLVDNDPLFEHLRVLRKEIADEEKVPPFVV
FSDKTLRDLCDKRPTVLEDLRQVSGIGEVKFEKYGQRFFDALQSFLEASI
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggagcaagctagacaaatgctacagcatcattttggctatgatacctttcgccaaggt
caagcccaaattattgaacaaacattacgagggcagtcaagtctttgtgtcatgccaaca
ggtggagggaaatccatttgctatcaaattccagcgttaatgcttgaggggttaaccatc
gtgatttcgccactgatttcactgatgcaagatcaggtggaggctttacgtacagcaaat
attccagcagcctatatcaatagtacgctgacagcacaggaagtggatgaaaccatgcag
cttgccagtgcgggttatttaaagctcctctatattgcacctgagcgtctggaaagtact
acgtttcttcaagtattgtcgtatttatctgtccctttacttgcgattgacgaggctcat
tgtatatcgcaatgggggcatgattttagaccaagctatcgttcgatccacaagcttttt
acactatggccacaaaaacccactgttttagcgctgacagccactgctactccaacagtt
tgtgatgatattcgtcaattgttagcgattgatgagcaggcaacggtcatgacaggcttt
tcacgtgagaatttggcactttcggtgttaattggtgaaaataaagaacgttatgtaaaa
aattatgtacaacaaaataaacaggaagtgggcatcatttatgcagctactcgaaaagct
gtggatgccatttatgatgtgctgagtcgctctggtgaagacgtagcaaaatatcatgca
ggtctttcagaaaacttgcgaatggctgagcaggagcggtttttaaaagatgaggcacgt
atcatggtggcaacgaatgcttttggtatgggtattgataaaagtaatgtgcgctttgtg
ttgcattatcaaatgcctcgtaatatggagagctattaccaggaagcgggtcgtgctggc
cgagatggtctgccaagtgcttgtattttattgtatgcttcaggggacgttcaaacacag
cgttttcttatcgaacagtcacaggatgaggctcgtattacacaggagctagctaaactc
caaacaatggtcgattattgccatactgagggctgcttacagaatgcgattttagcgtat
tttggagaagtagaggaggagccgtgtgggcggtgtagtaactgtattgacgggcgagca
gtgacggatgtgacagaggatgcgcaaaaggtgctggcctgtgttgtgcgtatgggacaa
aaattcggtaagaccatggtggcgcaggtgttaattggctctaaaaatcaaaagatagct
gaatttggctttgcccgtttatcgacctatggcattttaaaaggacaatatgcctcaaag
gatgtctctaactttatcgaatttttaattgcagagggcttgctggccgtgaagcatggt
acattccctacaatttatgtatcagctgaaggcaaggaagtgctacttggtaatcgacag
gtcatgcgcaaggaagctgtcacagtgaagaagctagtggataatgatccattatttgaa
cacttacgggtattacgcaaagagattgccgatgaggaaaaggtaccaccatttgttgta
ttttccgataaaacgttacgtgatttatgtgataagagaccaactgtattggaggattta
cgacaggtgagtggtataggggaagtaaaatttgagaagtatggtcaacgcttttttgac
gcactacaatcgtttttagaagcctctatttaa
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