Lysinibacillus capsici: ICJ70_17470
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Entry
ICJ70_17470 CDS
T08448
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lcap
Lysinibacillus capsici
Pathway
lcap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ICJ70_17470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcap03019
]
ICJ70_17470
03400 DNA repair and recombination proteins [BR:
lcap03400
]
ICJ70_17470
Enzymes [BR:
lcap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ICJ70_17470
Messenger RNA biogenesis [BR:
lcap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ICJ70_17470
DNA repair and recombination proteins [BR:
lcap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ICJ70_17470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
SNF2-rel_dom
AAA_22
Cas3-like_C_2
DUF5637
DEAD_2
HEM4
Motif
Other DBs
NCBI-ProteinID:
UNT54298
LinkDB
All DBs
Position
complement(3414168..3415610)
Genome browser
AA seq
480 aa
AA seq
DB search
MELEQLLYKHFGYSSFRPGQKEVIEALLQEQDVIALLPTGMGKSLCYQLPAYTLDKPVLI
VSPLLSLMQDQVEELKRFGEKRVVALNSFLSLTEKRYVLHYLEQYRFIFTSPEMLLQQQV
QEKLTQMKLGLIVVDEAHCISQWGFDFRPDYLRIGDWLSRENRPPILALSATATKKVVRD
IWETLSLKAPFEFMYNVDRPNIHLGRVVVEDKADKARWLMRHVTETAGPGILYVSSRKRA
QQYSEALLQAGVRVAAYHAGYGVEDRQFIQQQFIAGELDWIVATNAFGMGINKLDIRQVI
HESMPANIANYMQEIGRAGRDGHSALAILLYAEGDEELAKFVVTGDLPTLHHVDRYQELL
SQQIQPIQMLKNGELSETAFRVLDYWLQRESSEQVKVRLNHLALEKYNAVNEMLQIIQTK
DCIREHLVGYFGQKLQKKPENCCENCGIHYDVIKKVRLKEKKKVEMAKWESRLQQLLMGN
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggaacttgaacaattattgtataagcattttggttattcatcatttcgaccaggacag
aaagaagtcattgaggccttactgcaagaacaagatgttattgcgttattgccaacggga
atgggaaaatcactctgctaccagctaccagcctatacactagataagcctgtactaatt
gtttcaccattactctcattaatgcaggatcaagtagaagagctgaagcgttttggggaa
aaaagggtggtagctttaaattcctttttatcgctaacagagaaacgttatgtattacat
tatttagagcaatatcgttttatttttacttccccagagatgctgctccagcaacaggta
caagagaaactgacgcagatgaagctaggtttaatcgtagtagatgaggcacattgtatc
tcacaatggggctttgattttcgaccagattatttacgaataggtgactggctatcgaga
gaaaatcgtccgccaattttggcattatctgctacagcaacaaagaaggttgttcgagat
atatgggaaactctatctctcaaagctccattcgagtttatgtataatgttgaccgcccg
aatattcatcttggtcgtgtagtagtggaggataaggctgataaagctagatggctcatg
cgccatgttacggaaacggcaggacctggtattttatatgtttcctcacgtaaacgggcg
caacaatatagcgaagccttattacaagcgggcgttcgtgttgctgcgtatcatgctggc
tatggggtggaggaccgtcaatttattcaacagcaatttatagctggtgaacttgattgg
attgttgcaacaaatgcttttggcatgggcattaataagcttgatatacggcaggtcatt
catgaatcaatgcctgccaatatagcgaattatatgcaggaaattggacgtgcaggacgg
gatggtcattctgcacttgctattttactgtatgctgaaggtgatgaggagctggctaaa
tttgttgtgacaggcgatttaccaactttacatcatgttgaccgctatcaggagctgcta
tctcagcaaatacagccaatccaaatgctgaaaaatggggagttaagtgagacagccttc
cgtgtgttagactattggctgcagcgagagtcttcggaacaagtgaaggtccgattaaat
catttagcactagagaaatacaatgcagtgaatgaaatgcttcaaatcatacagacaaaa
gactgtattcgtgaacatttagtcgggtattttgggcaaaaattgcagaaaaagccggaa
aactgttgtgaaaattgtggaatccattatgatgtaatcaagaaagtacgcttaaaagag
aaaaaaaaagtagaaatggcaaagtgggaaagtcgattgcaacaactattaatgggtaat
tag
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