KEGG   Lysinibacillus capsici: ICJ70_19010
Entry
ICJ70_19010       CDS       T08448                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
lcap  Lysinibacillus capsici
Brite
KEGG Orthology (KO) [BR:lcap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lcap03016]
    ICJ70_19010 (truB)
Enzymes [BR:lcap01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     ICJ70_19010 (truB)
Transfer RNA biogenesis [BR:lcap03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    ICJ70_19010 (truB)
 Prokaryotic type
    ICJ70_19010 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2
Other DBs
NCBI-ProteinID: UNT54581
LinkDB
Position
complement(3724942..3725853)
AA seq 303 aa
MNGILPLWKERGMTSHDCVFKLRKILRTKKVGHTGTLDPGVEGVLPICIGQATRIAEYLT
DAGKIYEAIISIGRTTTTEDAEGETVEEDLTIKNFSREQLLEVLASLTGVIEQTPPMFSA
VKVNGKRLYEYARKGESVERPTRQVTIYDLELLDELAHYEGQEITFPVRIACSKGTYIRT
LAVQIGEALGYPAHMKELVRTASGTFTRENCFTLAQVAELMEAEQVATCILPVEYALADY
PFIEITNANEKEIFNGQVLPADALLNSHDKIVYGINGKAVAVYQAHPTKDGLMKPHKMFP
TIE
NT seq 912 nt   +upstreamnt  +downstreamnt
atgaacggtattttaccgctttggaaagaaagaggcatgacaagccatgactgtgtcttt
aaattacgcaaaattttgcggacaaaaaaagttggacatacagggacacttgatccaggt
gttgagggcgtactaccaatttgtattggccaagcaactcgaatagcagaatatctaact
gatgcagggaaaatctatgaagcaattatttcaataggtcgtaccacaacaaccgaggat
gcagaaggtgaaaccgttgaagaagatcttacgataaaaaatttttctcgggagcagttg
ttagaggttttagcttcattaactggcgttattgaacaaacaccacccatgttttcagca
gtaaaagtaaatgggaagcgcctctatgaatatgcgcgaaaaggcgaaagtgttgaaaga
ccaactcgccaagtaacaatttatgatttagagctacttgatgaactagcacattatgag
gggcaagaaattacatttccagtacgtatcgcttgtagtaaagggacatatattcgaaca
ttagctgtgcaaattggtgaggctcttggctatccagcgcatatgaaagagcttgtacga
actgcttcaggtacttttacacgagaaaactgttttacgttagcacaggttgctgaacta
atggaggctgagcaagtagctacctgtattttacctgtcgagtatgcattagcagactat
ccatttattgagattacgaatgccaatgaaaaagaaattttcaatggacaagtgcttcca
gcagatgcattattaaatagtcatgataaaattgtgtatggaatcaatggaaaggcagtt
gcggtttatcaagctcacccaacaaaggatggtttgatgaagccacataagatgtttccg
acgatagagtag

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