Lysinibacillus capsici: ICJ70_21855
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Entry
ICJ70_21855 CDS
T08448
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
lcap
Lysinibacillus capsici
Pathway
lcap00550
Peptidoglycan biosynthesis
lcap01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ICJ70_21855
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcap01003
]
ICJ70_21855
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lcap01011
]
ICJ70_21855
Enzymes [BR:
lcap01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
ICJ70_21855
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ICJ70_21855
Glycosyltransferases [BR:
lcap01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
ICJ70_21855
Peptidoglycan biosynthesis and degradation proteins [BR:
lcap01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
ICJ70_21855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
UNT55120
LinkDB
All DBs
Position
4335384..4337438
Genome browser
AA seq
684 aa
AA seq
DB search
MKRKSYHRKQQRVKRTRKSLTLFVAFTSAIVVAFVALRIYVQVAGAPPLTVPKASIFLDE
NENQIGDHFTNQRRYWVGLDEMSPYLKEAVVAVEDKDFYQHGGFDYSRIAGAILVDIKAG
GKVQGASTITQQYARNLYLSHEKSWTRKLNEALYAYRLEVFYDKDEILEGYLNTVYYGHG
MYGVEAASRFYFGKSASDLTLAEAAMLTGVPKGPSIYSPIANLDKATNRQHVILKLMADQ
GAITQEEKTRAENEQLVLKNDSWVATKSVAPYFLDVAWQEASEILKSKNLDISEGGWTIQ
TTLNLEHQKAAEEAVAKNMPANDLQSAFVSMESKTGAVTALVGGRDYSVSSFNRVTQAKR
QPGSTIKPILYAAALENGYTPLTFLDVGETTFTYDNGRGTYAPKNVNGQFADHDMTMAQA
IAISDNIYAVKTLEDIGFKEFHDMANRFNVGIGAKDNLSIALGTIETTLYEMTNAYNILA
SRGQQTTPTTIVSIKNAHGDVIYENKDVASKAETAISKENAYILTEMMTGIFDPVFSDYS
PATGISIRSRMTHTYAAKSGSTNSDQWLIGFTPRLTAGVWNGYDQGKNLTTKEDTAATKQ
IWIDFMETVNKGTKNEDFKKPKGVEGVVIDIETGKLATDACPKQRLVYVESKDVPTEKCT
NFDILDSNTWGEFWNMLPFSIFKD
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaaaagctatcatcgaaagcagcaacgtgtaaagcgcacacgcaaaagcctt
acgttatttgtggcctttacatctgcaattgtcgtagcgtttgtcgcactccgcatctat
gttcaagtggctggtgcaccgcctttaaccgtaccaaaggcttctattttcttagatgaa
aatgagaaccaaattggggatcactttacaaatcaacgacgatattgggtcggcctcgat
gagatgtcaccttatttaaaggaagcagttgttgctgttgaagataaagatttttatcaa
catggcggtttcgactattcacgtattgctggtgccattttagtggacattaaagctggc
ggtaaggttcaaggagctagtactattacgcaacaatatgctcgtaatctttatctttcc
cacgaaaagtcttggacacgtaaattaaacgaagccctgtatgcttatagattagaagtt
ttttatgacaaggacgaaatactagagggctatttgaatacggtatattacggtcatggc
atgtatggagtagaagctgccagtcgtttttatttcggaaaatctgccagtgatttaaca
cttgctgaagcagcaatgctaacaggcgtaccaaaaggacctagtatctactcaccaatt
gccaatttagataaggctaccaatcgtcaacacgttattttaaaacttatggcagaccaa
ggtgccattacacaagaggaaaaaacgcgtgcggaaaatgaacagctcgtcttaaaaaat
gatagctgggttgcaaccaaatctgttgccccttatttcctggatgtggcttggcaagaa
gccagtgaaatcttaaaatcaaaaaaccttgatattagtgaaggtggctggacgattcaa
acaacgctgaatctggagcatcaaaaagcggctgaagaagcagtagccaaaaatatgcct
gccaatgatttgcaatctgcgtttgtaagtatggaatctaaaacaggagctgtcactgca
ctagttggtggtcgtgattattcagtaagctcatttaaccgagttacacaagccaaacgt
caaccaggctctactatcaagccgatcttatatgcagcggcgctagaaaatggttacacg
ccactaacttttttagatgttggggaaacaacttttacgtatgataatgggcgtggcacc
tatgcacctaaaaacgtcaacggtcaatttgcagatcatgatatgacgatggcacaagca
attgctatctcagacaatatttacgcagtaaaaaccttagaggacattggcttcaaagag
tttcatgatatggcaaaccgttttaatgtaggaattggcgcgaaggataatttatcaatt
gcactgggaacgattgaaacgacattatacgaaatgacaaatgcatataatattttggca
tcgcgaggacagcaaacaacaccaacaaccattgtatccattaaaaatgcacatggagat
gttatttatgaaaacaaagatgtagcaagcaaagctgaaacagccatttctaaagaaaat
gcatacatcttaacagaaatgatgacaggtatttttgatccggttttcagtgactattca
cccgctacaggaatcagtattcgttcacgtatgacacacacatatgctgctaaatcaggt
tctacgaatagtgatcaatggttaattggttttacaccaagactaactgctggtgtatgg
aatggctatgatcagggtaaaaaccttaccacgaaggaagatactgctgcaacaaagcaa
atctggattgactttatggaaacggtcaacaaaggtacaaaaaatgaggatttcaaaaaa
cctaaaggtgtagagggcgttgtcattgatattgaaacaggtaaattagcgactgacgct
tgtcctaaacaacgtctagtctatgtagagtcgaaggatgtaccaactgaaaaatgtaca
aacttcgatattctcgacagtaatacatggggagaattttggaatatgctaccattctct
atatttaaggactaa
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