Lysinibacillus capsici: ICJ70_22410
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Entry
ICJ70_22410 CDS
T08448
Name
(GenBank) ATP-binding domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lcap
Lysinibacillus capsici
Pathway
lcap03420
Nucleotide excision repair
lcap03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ICJ70_22410
03430 Mismatch repair
ICJ70_22410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcap03400
]
ICJ70_22410
Enzymes [BR:
lcap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ICJ70_22410
DNA repair and recombination proteins [BR:
lcap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ICJ70_22410
MMR (mismatch excision repair)
Other MMR factors
ICJ70_22410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C_2
UvrD_C
UvrD-helicase
Viral_helicase1
AAA_19
DEAD
AAA_30
SLFN-g3_helicase
ResIII
NACHT
nSTAND3
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UNT55226
LinkDB
All DBs
Position
4450637..4452862
Genome browser
AA seq
741 aa
AA seq
DB search
MTVQHPDFQAEVERLAYTQGYMQQILDESQRDLKSAQENIRKSMADLDYLDSSLSYLNIL
TNARFFEMARNQKEGLEAVRKKPYFARIHFQKTGDPEEFLYIGKTSLFHRETHEPIIVDW
RSPVANVYYDGRLGDMEYDVRGEVHKGHLFAKRQYKIENGELLDIRDIDLTTNDELLQEA
LAGKADVRLTEIVSTIQKEQNEIIRAHLRQPIIVQGAAGSGKTTIALHRISYFLYTMGEH
FNPEQLMILAPNKLFIDYIGDVLPELGVDKICQTTFTDYVLSATKLKLKLQNPNEQLELL
VAGGSQPTDWIAEMKGSLYYRDVIERYVQKLEQRIAEQFEDVYIEKYCIMRASHLKKLFL
YEFSYMPIEKRLEHIKKVLASHVRQKKQAVLATLHKKYDEALGKALNGIRDDEKRRRVVT
KFIDERDERIPAIEKETKTTASAYMRRFPKHNIKTLYRTLLTDAELLAELAPEWHYLEQQ
QFLQAHRKEQWALEDLAALYYLQARLKGIADEWKMRVVFIDEVQDYSLFQLAALKAGLDT
DMFTMVGDLAQGIHSYRSLTAWEPVQSLFPRASFRTLQKSYRTTIEIMEVANQILAQMNE
QLPLVEPVVRHGNVPSFIQEEQFDAFKIKEIFEAIRQNGHRSIALICKTTAEAITMQQAL
KDNDIASQLLTENESINQEMLLVVPSHLAKGLEFDAVIVAAYDTPFYDTPIDRKLLYVAL
TRAMHELYLIGPSQKTFLLEN
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgactgtacaacatccagattttcaggctgaagtagagcggttagcgtatacccagggc
tatatgcaacaaatattagacgaatcacaacgagatttaaaatctgctcaagaaaatatc
cgtaaatctatggccgatcttgattacttagattcgagtttaagttatttaaatatctta
acaaatgccagattttttgaaatggcacgtaatcaaaaagaaggtctagaggccgttcgc
aagaagccctatttcgctagaatccatttccaaaaaaccggtgacccagaagaattcctt
tatattgggaaaacatcactatttcatcgtgaaacccatgagcccattattgttgactgg
cgctcacccgtagctaatgtttattatgatggacgtcttggtgacatggaatacgatgtc
cgtggtgaagttcataaaggacatctctttgctaaaaggcaatacaagatcgaaaatggc
gaattactcgatatacgagatattgatctaacaacaaatgatgaactactacaagaagca
ttagctggaaaagctgatgtccgtctaactgaaattgtttcaacaattcaaaaggaacaa
aatgaaattattcgagcacatcttcgtcaaccaattattgtacaaggtgctgctggtagt
ggaaaaacaaccattgctctacacagaatatcctatttcctttatacaatgggtgaacat
tttaatcctgagcagctcatgattttagcaccgaataaattatttattgattatataggc
gatgttttaccagagcttggcgtcgataaaatatgccaaactacttttacagactacgtt
ctttctgccactaaattaaagcttaagcttcaaaatccaaatgagcaattagaattgctc
gttgctggaggaagtcagcctactgactggattgctgaaatgaaaggctcactttactat
cgtgatgtcatcgaacgctacgtacaaaagctggaacaaaggatcgcagagcaattcgaa
gatgtctatattgaaaaatactgtatcatgcgtgcttcccacctgaagaagctgttttta
tatgaattctcatatatgcctatcgaaaagcgacttgaacatattaaaaaggtcttagca
agccatgtacgtcaaaaaaaacaggctgttttagctacactccataaaaagtatgatgaa
gcattgggtaaagccttaaatggaattcgagatgatgaaaaacggcgacgtgttgtcaca
aaattcattgatgagcgtgatgaacgaattcctgccattgaaaaagaaacgaagacaacg
gcatcagcttatatgcggcgctttcccaaacataatattaaaacactctatcgtaccctt
ctcaccgatgcagaactattagcagaactcgcccctgaatggcattaccttgaacagcaa
caatttttgcaggcacatcgtaaagaacaatgggcactcgaagatttagctgcactatac
tatttacaagcacgtttaaaaggcattgcagatgaatggaagatgcgtgttgtctttatc
gatgaggtccaagattacagtttatttcagcttgctgctttaaaagcaggtcttgataca
gatatgtttactatggtcggtgatttagcacaaggtatccatagctatcgctcattaaca
gcctgggagcctgtccaaagcttatttcctcgtgcaagcttccgcactttgcaaaaaagc
tatcgaacaacaattgaaattatggaagtcgcgaatcaaattctagcgcaaatgaatgaa
cagctacctttagtagaacccgttgtgcgtcacggtaacgtaccaagttttattcaagag
gagcaattcgatgccttcaaaattaaagagatctttgaagccattcgtcaaaatggtcac
cgatccatcgctttaatttgcaaaactactgcagaagccattactatgcaacaggcatta
aaagataatgacattgcttcacaactactaacagaaaatgaatctattaatcaagaaatg
ttacttgttgtcccaagtcacttagctaagggacttgaatttgatgccgtcattgtagct
gcctacgatacaccattttacgatacaccaattgatcgaaagctactttatgtagctctt
acacgagctatgcacgagctatacttaatcgggccatcccaaaagacatttttattagaa
aattaa
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