Lysinibacillus capsici: ICJ70_24175
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Entry
ICJ70_24175 CDS
T08448
Symbol
rnmV
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
lcap
Lysinibacillus capsici
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
ICJ70_24175 (rnmV)
Enzymes [BR:
lcap01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
ICJ70_24175 (rnmV)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Toprim_2
DUF3226
Toprim_3
PMI_typeI_hel
DUF1340
Motif
Other DBs
NCBI-ProteinID:
UNT55520
LinkDB
All DBs
Position
complement(4817259..4817825)
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AA seq
188 aa
AA seq
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MQIKEIIVVEGKDDTTAIKRAVQADTIETNGSAISEETLKRIQHAQEKRGVIVFTDPDYP
GRRIRAIIEERVKGVKHAFLPKAKTIAKNGKGLGIEHAADEDIREALQHVYTPIHEVLNK
EVITLEDLMTARLIGHPQAKQRRDRLGEILNIGATNGKQLHKRLKMFQITEEQFGAAIAQ
LDQEENDA
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaattaaagaaattattgttgttgaaggaaaagatgatacgacagctattaaacgt
gctgtacaagcagatactatagaaacaaatggatctgcaatttctgaagaaacgttaaag
cgaattcagcacgcccaagaaaaacgtggagttattgtatttactgatccagactatcca
ggacgtcgaatacgggccattatcgaggagcgtgtaaaaggggtgaagcatgccttttta
ccaaaagcgaaaacgattgctaaaaacggtaaagggttagggattgagcatgctgctgat
gaggatatacgtgaggcattacaacatgtctatacccctatacatgaggtgctaaacaaa
gaggtaattacactggaagatttaatgactgctcgtttaattggacatccacaagcaaag
cagcgtcgtgatagactaggggaaatcttaaatataggtgctacaaacggtaaacaactt
cataaaagattgaaaatgtttcagattacagaggagcaatttggtgcggctatcgcacag
ttagatcaggaggaaaatgatgcataa
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