Lysinibacillus capsici: ICJ70_24320
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Entry
ICJ70_24320 CDS
T08448
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
lcap
Lysinibacillus capsici
Brite
KEGG Orthology (KO) [BR:
lcap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcap03021
]
ICJ70_24320 (sigB)
Transcription machinery [BR:
lcap03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ICJ70_24320 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF134
HTH_37
TnsD
DUF1492
HTH_3
HTH_28
Sigma70_ECF
GerE
HTH_50
KORA
NirdL-like_HTH
PhyR_sigma-like
Motif
Other DBs
NCBI-ProteinID:
UNT55536
LinkDB
All DBs
Position
complement(4840342..4841127)
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AA seq
261 aa
AA seq
DB search
MSKESLHKSSSKEDVLKWIELYQSTEDDEAQTNLVIHYRYLVESIARKYSNGKSYYDDIV
QVGMLGLLGAIRRFDPNVGRSFEAFAVPTIVGEIKRFLRDKTWDVHVPRRIKELGPRIKS
TVEALTSELQRSPSIKDIAERLEVAEEEVLEAMEMSRSYQALSMDHSIESDSDGSTVTLF
DILGREDDGYEMTNKRMIVQDALVVLNEREKQIIQLTYLEQLSQKEAGERLGISQMHVSR
IQRKAIKKLQEAILASGGVSL
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaatcactacataaatcttcatctaaagaagatgtacttaagtggattgaa
ttgtaccagtcaacagaggatgatgaagcacaaaccaatttagtgattcattatcgatat
ctagttgaatctatagctcgtaaatattcgaatggtaaatcttattatgatgatattgtt
caagtagggatgctgggattgttaggtgcaataagacgttttgatccgaatgttggtcgt
agttttgaagcttttgcggtgccaacaattgttggggaaatcaaacgttttttacgtgat
aaaacatgggatgtgcatgtgcctagacgtataaaggaacttgggccgaggattaaatca
acggtggaggcgctgacaagtgagttgcagcgttctccatccattaaagatattgctgaa
cgattagaagtagcagaagaagaggtactcgaagctatggaaatgagccgtagttatcaa
gctctttctatggaccattcgatagagtcagactcagacggtagtacagtcacgttattc
gatattttaggcagggaagacgatggctatgaaatgacaaataaacgaatgattgttcaa
gatgcgctggtcgttttgaatgagagggaaaaacaaattattcagcttacatatctagag
caacttagtcaaaaagaagctggagaacgattagggatttctcaaatgcatgtatcgagg
atacaaaggaaagcaataaagaaattacaagaggctattctagcaagtggcggtgtttcg
ctctaa
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