Pseudolactococcus carnosus: BHS00_02260
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Entry
BHS00_02260 CDS
T07226
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lcar
Pseudolactococcus carnosus
Pathway
lcar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BHS00_02260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcar03400
]
BHS00_02260
Enzymes [BR:
lcar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BHS00_02260
DNA repair and recombination proteins [BR:
lcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BHS00_02260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
PIF1
T2SSE
eIF3_p135
UvrD-helicase
Zn_ribbon_6
AAA_19
AAA_11
NACHT
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QDJ25477
LinkDB
All DBs
Position
453933..456329
Genome browser
AA seq
798 aa
AA seq
DB search
MCYQIAKIIIDVPTMQTDKPFSYLIPEDLAQLVAVGMRVHVPFGRSNRLMQGFIVALSDG
SDETELSDLSELKAISEVLDFEPVLNSEQLALADDMRQTVFSYKISILKAMLPNLLNSSY
DKVLTTADSEVAKTYFATKKEIHFSSLDTKEQAVMMKLHREGRINMRYVAQSKAHVKTEK
RVSLVDKLALMNLAITSRATKRLAMKAFLETQPEETIWTYSELLVTFSRDVVTFFVSQGI
LRLTEVEVSRSQGYFDQVVPDEKKQLNSEQTRAYEAIIQANGGTFLLEGVTGSGKTEVYL
QVIAHALAQGKTAIMLVPEISLTPLMTNRFIARFGDRVAIMHSGLSDGEKYDEWRKIVSG
EAKVVVGARSAIFVPLKNIGTIIIDEEHETSYKQDSNPRYHARDVAIWRAGYQQATLVLG
SATPSLETRARAQKEVYQLLHLTHRANVQAKIPEVRILDMRKHLNDQSASFSKVLLDKIS
EKIARQEQVVLMLNRRGYSSFIMCRDCGYVPDCPNCDISLTLHMDTKTLNCHYCGHTASI
PYTCPNCQSKQIRYYGSGTQKVEEELLDLIPDARVLRMDVDTTKKKGAHEQILSRFGAGE
ADILLGTQMIAKGLDFPNVTLVGVINADTALNLPDFRSSERTFQLLTQVAGRAGRAEKAG
EVLIQTFNPEHYAIKLAQTHDYEGFYKQEMAFRRQLNYPPYFYTVQLVVSHQLEEEAVKA
SYEIMSLLTAQLTEHARILGPIPKPIARTHNLYHYQLLIKYRFEPNLVQVLNSVLEMTQN
RAHKKLRIIIDNEPQNFM
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtgttatcaaattgctaagattattattgatgtgccaactatgcaaacagataagcct
ttttcttatctgatacctgaggatttggcgcaactagtagcagttggtatgcgggtccat
gtgcctttcggacgtagcaatcgactcatgcaaggatttattgttgcactctcagatgga
tcagatgaaactgagttatctgatctatctgaactaaaggcaatttccgaagtgttggat
tttgaacccgtgctcaacagcgaacagcttgccctagcagatgacatgcgacaaacggtt
ttctcttataaaatctctatactcaaagctatgctacctaatctacttaattcttcttat
gataaggtactgacaacagcagattcggaagtagctaaaacctattttgctactaaaaag
gagattcacttttcaagcttggacactaaagaacaggctgttatgatgaaactccaccga
gaagggcgtatcaacatgaggtacgttgcgcagtctaaagcacatgtcaaaactgaaaag
cgcgtgtcattagttgataagcttgccttgatgaacttagcaatcacatcgcgtgcgaca
aagcgtttggctatgaaggcgtttctagaaacacagcctgaagaaacgatctggacctat
tcagaactgcttgtgacattctcgcgagatgttgtgacatttttcgtgtcccaagggatt
ttacggcttacagaagtggaagtgtcgcgttcacaaggttactttgatcaggtggtgcca
gatgaaaagaagcagttaaattcagaacaaactcgtgcatatgaggcgatcattcaagct
aatggtggcacgtttctattagaaggagttactggttctggtaaaacagaggtttatcta
caggtgattgcccatgcacttgcacaaggaaaaacagcaattatgttagtgccagaaata
tcattaacaccgctgatgaccaatcgctttatcgctagattcggagatcgtgttgcgatt
atgcattcaggattatcggatggcgaaaagtatgatgaatggcggaagatagtatctggt
gaagcaaaagttgttgttggtgcacgatcagcaatatttgtaccactaaaaaatattggt
acgattattattgatgaggagcatgaaacaagttacaaacaagatagcaatccccgctat
catgcaagagatgttgcgatttggcgcgccggctatcagcaagctacactagttttaggg
tcagcaacaccaagcctagaaacacgagcacgtgcacaaaaagaagtctaccagttactg
catcttacccaccgagctaatgtgcaagctaagattcctgaagttcggattttggatatg
cgcaagcacttaaacgaccagtcagcctctttctcgaaagtgctattagataaaatttcg
gaaaaaatcgctagacaggaacaggttgttttgatgctcaatcgacgggggtattcctcg
tttattatgtgtcgggattgcggctacgtgcctgattgtccgaattgtgatatctcctta
acgctacatatggatactaagacgctaaactgtcattattgtggacatacagcgtctata
ccgtatacttgtccaaattgtcaaagtaagcaaattcgctattatggcagtgggacgcaa
aaagtggaagaagaattgctagacttgattcctgatgcccgagttttaagaatggatgtg
gatacaacaaagaaaaaaggtgcacatgagcagattctatcccgttttggtgcaggagaa
gcagacatactgctagggacacagatgattgctaagggacttgattttcctaatgttact
ctggttggtgtcatcaatgccgatacagcgctcaatcttcctgattttagatcatcagaa
cgcaccttccagttattaacgcaggtggctggtcgtgccggccgcgcagaaaaagcagga
gaagtcctgattcagacctttaaccctgaacactatgcaattaagctagcgcaaacgcat
gattatgaaggattttataagcaagagatggcatttaggcggcaactcaattacccacct
tacttttatacggtgcaactggttgtttcacatcaacttgaagaggaggcggtaaaagca
tcatatgaaatcatgtcgcttttaacagcgcaactcactgagcatgctcggattttaggg
ccaatcccaaagccaattgctaggacgcataatttatatcattatcaactcttgattaaa
tataggtttgaaccgaatctggtgcaagtgttgaactcagttttagagatgacgcagaat
cgcgcacataaaaaattacggatcatcattgataatgaaccgcaaaacttcatgtaa
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