Pseudolactococcus carnosus: BHS00_02390
Help
Entry
BHS00_02390 CDS
T07226
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lcar
Pseudolactococcus carnosus
Pathway
lcar03410
Base excision repair
lcar03430
Mismatch repair
lcar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BHS00_02390
03430 Mismatch repair
BHS00_02390
03440 Homologous recombination
BHS00_02390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcar03400
]
BHS00_02390
DNA repair and recombination proteins [BR:
lcar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BHS00_02390
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BHS00_02390
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BHS00_02390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
ssDNA-exonuc_C
DHH
DHHA1
TPP_enzyme_N
Motif
Other DBs
NCBI-ProteinID:
QDJ25498
LinkDB
All DBs
Position
478588..480813
Genome browser
AA seq
741 aa
AA seq
DB search
MIIPTYDWQLNSDEPTAEFVKLVKKQKLDTLTAKMLWKRQIRTADALASFLNPTLETLHD
PFLFYSMRRAVERIRQAIEMQEIILIYGDYDADGMTSASIMKTALDEIGAESLVYLPNRF
TDGYGPNLDVYKYFIENEGVGLIITVDNGVAGHEAIAYAQENGCDVIITDHHSLPETLPD
AYAIIHPQHPDGQYPFPDLAGCGVAFKVACALLEYVPSEMLDLVAIGTIADMMSLTDENR
TLVKFGLEILKNTERVGLESLIKIAGVDKHSLTEESIGFQIAPRLNALGRLDDPNPAIDL
LTGWDEAETQQIAEMIDQKNQERKEIVARMLVEAESQLDDSPVQFIYQPGWHPGVLGIVA
GQLVQKTGKPIVMLTEEAGILKGSARSIPAFDIFSALSAHHDLFIAFGGHAQAAGMTFEL
ANLPAIKAVIAVFIVHQKLDMSQKAPLVLDDTIVLSDITLDTIKSLGKVAPFGQDNPKPI
FLIKDYQVVQSRAMGQQNAHLKLKIQQDKTQLEAVYFGQGMAALEFEQAAPELAVTLSVN
TWNGNTSVQLMIVDAKVNGSQLIDLRNQQHQTAIPDDASVFTNELVEQENLSQVLVVDET
PHDKAGLDRLKQLITSQDFTAVYFKNSIKQTYYLTGGGTHEQFAKFYKTIYQYPEFDVRY
KLADLADYLKIPLILLVKMVQIFEELAFVNIKDGVMTVNKEAKKREISESQIYQDLQVLV
QIQSVFALSPVGEIYEKLKEK
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgatcatacctacctatgattggcagcttaattcagatgaaccgacagctgaatttgtt
aagttagtcaaaaaacaaaaattagatacacttacagccaagatgctttggaaacggcaa
atcagaacagcagatgccctagcaagctttttgaatccaacactagaaaccttacatgat
ccatttttattttatagcatgcgacgtgctgttgaacggattcgccaagcaattgagatg
caagaaatcatcttaatttatggtgactatgatgcagatgggatgacaagtgcgagtatt
atgaagacagcactcgatgagataggtgctgaaagcttggtttatctgccaaatcggttt
acagatggctacggaccgaatttagatgtttataaatactttatagagaatgaaggggta
ggcctgatcatcactgttgataacggtgttgcaggtcatgaagcgatagcttacgcccaa
gaaaatggctgtgatgtcatcatcactgaccaccattctctgcctgaaacactacctgat
gcatatgcaattatccacccccagcatccagatggccaatacccatttcctgatttagct
ggatgtggtgtcgcttttaaagtggcatgtgccttattagagtatgtcccatcagagatg
ttagacctggttgctattgggacgattgcagacatgatgtcactgactgatgaaaatcga
acactggtcaaatttggtctggaaattctaaaaaatacagagcgtgttggtctagaatcc
ttaatcaagattgcgggtgttgataaacatagcttaactgaggaatcgattgggtttcag
attgcgcccaggctaaatgcattgggtcgccttgatgatccaaatcctgcaattgactta
ctgacaggatgggatgaggcagaaacgcagcaaattgctgagatgatcgaccaaaagaat
caagagcgcaaagagattgttgccaggatgttagtagaggccgaatctcagctagatgat
agtccagttcaatttatttatcaaccgggctggcatccaggcgttcttggtatcgttgcc
ggtcaattagttcaaaaaactggcaagcctatcgtcatgttaacggaagaagcaggcata
ctaaaaggatctgccagatcgattccggcttttgatatcttttcagccctatctgcgcac
cacgacttatttattgcctttggtgggcatgcgcaagcagcaggcatgacctttgaatta
gcgaatttaccagctattaaagcggtaattgcggtatttattgtacatcagaaactcgat
atgtctcagaaagcaccacttgttttggatgacacgattgtgctttctgatatcacgctt
gatacgattaaatcacttggcaaagtagcaccttttgggcaagataatcctaaaccaatt
tttttgataaaagattatcaagtggttcaaagtcgtgcaatgggccaacaaaatgcacac
ctgaaactgaaaattcagcaagataaaacacagctagaagctgtttattttggtcagggt
atggcagcacttgaatttgaacaagccgcaccagaactggctgtaaccttatcagtaaat
acatggaatggcaacacatcagtgcaattgatgatcgttgatgcaaaggttaatgggagt
cagctgattgatttgagaaatcaacagcaccaaacagcaattccagatgatgcatctgtg
ttcacaaatgaactcgtcgaacaggaaaacctgagtcaggtattagtggttgatgagaca
cctcatgataaagctggccttgatcggctgaaacaactgataactagtcaggacttcact
gcagtttattttaaaaatagtattaagcaaacctattacttgactggtggtgggacacat
gaacaatttgctaaattttataaaacgatttaccaatatccagaatttgatgtgcgatat
aaactcgctgacttggctgattatttgaaaataccgcttattttattagttaaaatggta
caaatctttgaagaattagcgtttgttaacattaaagatggcgttatgacggtcaataaa
gaggcgaaaaaaagagagatatctgagagtcaaatctatcaagacttacaagtgttagtt
cagatacaatcagtttttgccctatcaccagtgggtgagatctatgagaaattgaaggag
aaataa
DBGET
integrated database retrieval system
