Pseudolactococcus carnosus: BHS00_04375
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Entry
BHS00_04375 CDS
T07226
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lcar
Pseudolactococcus carnosus
Brite
KEGG Orthology (KO) [BR:
lcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcar03016
]
BHS00_04375
Enzymes [BR:
lcar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BHS00_04375
Transfer RNA biogenesis [BR:
lcar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BHS00_04375
Prokaryotic type
BHS00_04375
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
FluMu_N
Motif
Other DBs
NCBI-ProteinID:
QDJ25836
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All DBs
Position
910518..911414
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AA seq
298 aa
AA seq
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MTYNGILAIYKEAGMTSHDVVFKLRKILQTKKIGHGGTLDPDVTGVLPIAVGQGTRVVEF
MTEAGKVYEGQVTLGFSTETEDASGEVVERTPVTQVPSEADIDLAMAEFIGEITQIPPMY
SAVKVNGRKLYEYARAGETVDRPERQVTLTEFVRTSDLVVDKDNQLLKFNFRVVCSKGTY
VRTLAVDLGAKLGYASHMSYLQRTASAGLNIADAFKLSEIEQLKEEDRLSEAFLPIEYGV
SDLEKVLLTAEQVKEISFGRFVTLASDAAIVAGFQENRLIAILQKRDGKLYKPKKVMI
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacatataatggtattttagcgatatataaagaagcgggcatgacgagtcatgacgtt
gtctttaagctacgaaaaatattgcagactaagaaaattggtcatggtgggacattggat
cctgatgtgacaggcgtcttaccgattgctgtcggtcaaggtacgcgtgttgtagaattt
atgacagaggctggaaaagtatatgaaggacaagttacgctaggcttttctactgagaca
gaagatgccagtggtgaggtcgtcgagcgtacgcctgtgacacaggtacctagtgaagct
gatattgaccttgccatggctgaatttatcggtgagattacacaaataccacccatgtat
tcggcagtcaaagtgaatggccgtaaactctatgaatatgcgcgtgctggtgagacagtc
gatagaccagaaagacaggtcacactgacagaattcgtcagaacgtctgatttagtggtt
gacaaagacaatcaactccttaaatttaactttagggtggtttgcagtaaaggcacttat
gtgagaacactagccgttgatttaggggctaaacttggctatgcaagccatatgtcttat
ttgcaacggactgcatcagcaggcttaaacatagcggatgccttcaagctgtcagaaatc
gagcagctgaaagaagaagatcgtttatcagaagcatttttaccgattgagtatggtgta
tccgatttagaaaaagtgctacttacagcagaacaagttaaagagattagctttggtaga
tttgtgacattggcatcagatgctgctattgttgcagggtttcaagaaaatcggttgatc
gcgatcttgcaaaaacgggatggcaagctttataaacctaagaaagtgatgatatga
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