Pseudolactococcus carnosus: BHS00_05410
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Entry
BHS00_05410 CDS
T07226
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lcar
Pseudolactococcus carnosus
Pathway
lcar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BHS00_05410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcar03400
]
BHS00_05410
Enzymes [BR:
lcar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BHS00_05410
DNA repair and recombination proteins [BR:
lcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BHS00_05410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD_C
Herpes_Helicase
HHH_5
UvrD-helicase
nSTAND3
AAA_22
5_3_exonuc
AAA_5
HHH
AAA
AAA_28
AAA_16
AAA_17
TsaE
NTPase_1
AAA_12
NPHP3_N
SLFN-g3_helicase
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
QDJ26026
LinkDB
All DBs
Position
complement(1131146..1133620)
Genome browser
AA seq
824 aa
AA seq
DB search
MADKLYFVGTIEAVFFSNPANFYKVLLLAITDTNADFKDDEIVVNGIIGDVVEGDSYKFF
GELTNHPKYGEQLKVTTYEKDVPTSGAGLVKYLSSEHFPGIGKKTAEKIVATFPEDTIDH
ILETPEQLSGILSSEKLAAFVKRLSENHGMEKILSKLAKYELPSKLNFQIYDLYKEATLD
VIKENPYQLVFDIKGIGFKKADKIAEDEGISATNDARIQAGLIHTVLTNSLESGDTYIEA
LDLLNQTIDLLESARNVEILADQVAEMINVLLAEGKLQAIGTKLFENSLYFAEDGIYQRL
DKLTNSKVTKLAQDKFETIIGDVEAKLEIRYDSLQKEAIYKALTHQFFILTGGPGTGKTT
VIKGIVQAYASLNHLDLNPDNYTDDVFPIVQLAPTGRAARRMNELTGLPAATIHRQLGLN
SDDLEDDFGNDLSGSLLIVDEFSMVDTWLANKLFAAILPSMTVIFVGDADQLPSVGPGQV
FADLLKIPDFATVRLDKIFRQGEGSTITNLAHDIKNGQLPVDFTAKKADRSYIESKAVNI
PNYIEQIASAWMKRGNDPFDLQVLIPMYKGVAGINQVNKSLQNLFNPLADRLEFLFQDTI
FRQDDKVLHLVNEASLDVFNGDIGVITDLVPAKYTESKQDEIVMSFDGNEVSYPRAEWYK
ITLAYAMSIHKSQGSEFPSVIVPMVASYHRMLERNLLYTAITRAKQSLILLGEGQSFQTA
VSRQGANRKTYLVERFGLTTTSDQAAARSEARPVKETVIETVVIDKETFKEVASDQPVSD
KQAVESTGQDAKAAAYVLTMENVLAIDPMIGMTAEDVAVFSKSK
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaactttattttgtggggactattgaagcggtattctttagtaacccagct
aatttttataaggtactattacttgccattacagataccaatgctgactttaaagacgat
gaaattgttgttaatggcattataggggatgtggttgaaggggatagctacaaatttttt
ggtgagctaaccaaccatcctaaatatggtgagcagcttaaagtaacgacctatgaaaaa
gatgtgcctacctcaggagcaggtctagtcaagtatttgtctagcgagcactttcctggt
attggcaagaaaacagctgaaaagatcgtcgcaacctttccagaagataccatcgatcat
attttagagacacctgaacaactatcaggtattttgtcttctgaaaaattagctgccttt
gttaaacgcttatctgaaaatcatggcatggaaaaaatcctatccaaactggccaagtac
gaactccctagtaagctaaattttcaaatttatgacctctataaagaggcgactttagat
gtgattaaggaaaacccctatcaactcgtttttgatattaagggcatcggctttaaaaaa
gcagataaaatcgccgaagatgaagggatttcagctaccaatgatgcacgtattcaagca
gggttaatccatacggtgctgaccaattcactcgagagtggcgacacgtatatcgaagca
ctggatttactgaatcagaccatcgacttgctagaatcagctagaaatgtagaaatttta
gctgaccaggtggcagagatgataaacgtcttgctagctgaaggtaaactgcaggcaatc
gggacaaaattatttgagaactccttatattttgcggaagatgggatttatcagcgccta
gataagctaaccaatagcaaagtaactaaattagcgcaagataaatttgagacgatcata
ggcgatgtcgaagctaagcttgagattcgctatgatagtcttcaaaaagaggcgatttat
aaggcactgactcaccaatttttcatcctaacaggtggaccaggaacaggtaagacaacc
gtaataaaaggaatcgttcaggcctatgctagcttaaatcatttggatttaaatcctgat
aattatacggatgatgtctttccaatcgtccagttggcacctacaggacgtgccgcacgc
cggatgaacgaattaactggcttaccggcagcgacgattcatcggcaactagggctaaac
tcggatgatttagaggatgactttggtaacgatttatccggcagtcttttgatcgtggac
gagttttcgatggtggatacctggctagccaataaactatttgcggccatcctaccctct
atgacggttatcttcgttggtgatgccgaccaactgccatcagttggccctggacaggta
tttgcggatctgcttaaaatccctgattttgcgaccgtcagattagataaaatcttccgt
cagggtgaaggctccacgattacaaatctggcgcatgatattaaaaatgggcaactccca
gtagactttactgctaagaaagctgatcggtcttatatcgaaagtaaggcagtcaatatc
ccaaactatatcgagcagattgctagtgcctggatgaaacgtggcaacgacccctttgat
ttacaagtattgatccccatgtacaaaggagtagcagggattaatcaggtcaacaaatca
ctgcaaaatttgtttaatcccctagctgatcgactagaatttctctttcaggatacgatt
tttaggcaagatgataaagtcctacatctggttaatgaagcatcactggacgtctttaat
ggtgatattggcgtgattactgatctcgtcccagccaagtatacagagtctaagcaggat
gagattgtcatgagctttgatggcaatgaagtcagctacccaagagctgagtggtacaaa
atcaccctagcctatgccatgtctatccacaagtctcagggcagtgagttcccaagtgtc
atcgtgcccatggtcgcgagttatcatcgcatgctagagcggaacttactttatacagcg
attacaagagctaaacagtccttgatcttactcggtgagggacagagcttccaaacagca
gtcagtcgacaaggcgctaaccgtaaaacctatctggttgaacggtttggactaaccaca
acatcagatcaagcagcagctcgttcagaagcaaggcctgtcaaagaaacagttatcgaa
acagtggtaatcgacaaggagacctttaaagaggttgcaagtgaccagccagttagtgat
aaacaagcagtcgaaagtactggacaagacgctaaagcagcagcttatgttctgaccatg
gagaatgtcctagcgatcgacccgatgattgggatgacggcagaagatgtcgctgtattt
agtaaatccaaataa
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